Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2269 ATGAATAGAGGTGTCTTGCAGAGCTCACCGGTGCAACAAATGATGACCGGAAACCCTAACTGGTGGAACATCAATACCATGAGGCCTCCTTCCCAACAAACTTCTCCTTTCTTGTCCACTACCACTCCTCCTTCCTACTTTCTAACTCCATATGCTCCCAATTCTTCTCTTCCTTTTCCTTCTTGGAATGGCAATCAAGAACTTCCTGAGTCTTGGAGCCACCTTCTCATGGGTGGACTGGTGGGTGAAGAAGATAAGGGTGACATGAGCCAGTTTCAGGCTAAGAAATTGGAGAACTGGGAGGAGCAAATGCTAAGTCAGGGTCCGAATGGTCATCTTGTTGATGTGAAGCAAGAGAGCTCGGTAAACAGCTATGTTTATGGACATGGTGGGAACGAAGAATTTCAGGCAGCAAAACCAGCTGCTGCCTGGTCTCAAATAGTGCCTCCTCCTGCTTCTTCTCCAAAATCCTGTGTCTCCAGTTTCAGCAGCAACATGTTGGATTTCTCCAACAATAAGACGGATGCCTCCAGGCATCCACCACCAGATCGATCTTCTGAGTGCAACAGCAGTGCAGCTGGTGGGGCACTCAAGAAAGCTAGGGTTCAACCAGCTTCTACAACTCAGTCTACCTTCAAGGTTAGGAAGGAGAAATTAGGAGACAGAATTACAGCCCTTCATCAGTTAGTTTCCCCCTTTGGGAAGACTGATACAGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATCGAGGCCCTTAGCTTACCATACTTGGGCAGTGGATCCGGAAATATGAGGCAGCAACAACAATCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAACACCCTGGTCAGCTGCTGAATGAAAGCTGCTTGAAGAGGAAAGCAGCCGGTGAGCAGGATTCGGAAGAAGAAGGAAAGAAGGACCTGAGGAGTAGAGGGTTGTGCCTGGTTCCAGTGTCGTGCACGCTGGGAGTTGGGAGTGAGAATGGAGCAGACTACTGGGCTCCTGCCCTTGGCGGAGGCTTTCGCTAG 1056 0.4858 MNRGVLQSSPVQQMMTGNPNWWNINTMRPPSQQTSPFLSTTTPPSYFLTPYAPNSSLPFPSWNGNQELPESWSHLLMGGLVGEEDKGDMSQFQAKKLENWEEQMLSQGPNGHLVDVKQESSVNSYVYGHGGNEEFQAAKPAAAWSQIVPPPASSPKSCVSSFSSNMLDFSNNKTDASRHPPPDRSSECNSSAAGGALKKARVQPASTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSGNMRQQQQSVQGEKNCIFPEHPGQLLNESCLKRKAAGEQDSEEEGKKDLRSRGLCLVPVSCTLGVGSENGADYWAPALGGGFR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2269 351 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 252 IPR011598 GO:0046983
Glsi01g2269 351 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 84 332 - -
Glsi01g2269 351 CDD bHLH_AtbHLH_like 211 260 IPR045239 -
Glsi01g2269 351 Gene3D - 205 278 IPR036638 GO:0046983
Glsi01g2269 351 MobiDBLite consensus disorder prediction 170 210 - -
Glsi01g2269 351 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 213 263 IPR036638 GO:0046983
Glsi01g2269 351 FunFam transcription factor bHLH68 isoform X1 210 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2269 Glsi-ChrGlsi01 85542378 85545355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2269 1 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.179 1.48e-72 227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g2269 01 85542378 85545355 Glsi01g2269 01 85542378 85545355 ECH