Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2257 ATGCACCGACATCGGTTTGCCTCTCTTGTGGATCTGAGTCTCTTGGAGCTCATTTCCATGACTTTAGGGAATATCCCGCAGGACTTAGTCATGTATAGATCATTCATGACATGTGATGATCCAAAAGGAGTTGTGGAATGTGGGACAATCAGAAAGTCCAAGTCTGGATCTCAGAAAATGAAGGGCAAGATAAAAAGCCAGAGGACGGCTGAGAACTTTGAGACATCTTTGCCAAACAAATCAGACAAGCAAGAGATAGTACTGAAAGGATCCACGGAAAAATCTTGCGATCCATCTTCCTTGCAGCTCATGGAGGTCTCCAGAGGCGCTCAAAGGTTGAACAACATGATTGATTCATGGTCTAGAGGTCTGAATCATGATGGAAGGTCTGAGGACATTGCAAAAGATTTGTTAAAAGGAGCTCTTGATCTGCAAGAATCTCTAGTCATGCTTCACAGGTTGCAGGAAGCTTCACAGCATATGCATATGTCTCGTTTGAAGAAAGAACAGAATGAGAAACCTGAAAGAGGCAGAATTGATGCAGAGAAGATAGATGGAAAGCATACTAACCAATGTAGAGAACAAAGTTATCCAATGGGATTTCAAAGACCCCGGCCTTCTGCAGATGGTTCTTCAAGGAATTGCAATGAGGAACTTAAGAGAGTGATCAAAGACAGTCTAGTTAGGCAAAATCTGTTTCCAGCTACAACCACTGAAGGATTGGATTCAGCATCAGAAATTCCCTCTACAAGCTCAAGCCAATCTTCTGGGGTTCATACTGATAAGCTTTCTGATTCATCTTTTTCATCAACAACTTCAAAGAAGGTAAGAGGCCCAAATCTAGTTGCCAAGCTAATGGGTTTAGAAGAATTCCCTTCAAGACCATTTCCAGCTGCTGTGCAGAAACAGCTGCAGGGTGAAAAGATTCTGAATCAAAAGAGACCTATGTTTGAGATAGATATGCCCAAGGTAAGAAAGACTAATTCTATAATAGAGAAGGTTGATCCAGAACGAAAGAAGACCCTCAGGGAAATTCTTGAGACTGTGCATTTCAAAGGACTTTTAAAGAAGAGTTCTGTCAGAGAGTCTAGGCTTCAGATCCATCATCGTTTCTATGATTCCCATTCCACACACTGTGATAATTTACCACCCATTGTACTTATGAAACCTCGATACAGTTTACATCACGAATCATTAAACACCCATGGGCTTGTTCATCCAGAGGAGTTATCCCTGAGAAAACTTAAAACAGAGGCAGTCCCATCCAAATCTATCAAACACAAACAAGGGTCCACCAGCATGGGGAATAAAACGGAAGAAGATGTAACCAAAAGGCTTACACAAGAGGAAAAGCCTAAACTCCTTAAAGAGTCCGTGAAACTGGTTGAAAAAGAGGTCAAGCCTATAAAAAAGTCTCCAATTAAGTTTAGCCACAAACCACAGGAACGAGAGGCAATTGTTACGAAAGCTAAGGTAAAAACCATTACCAGAAAACCACCAGAGAAGGAGATCTTTAAACCTAGAATTGTGGCAAGATCTCAAGATCAAAGAGAAATCACCCCCACAAAGTATAGGACGCCACCAAGTGGGTCCAGAATCAAGAAGAATGAGATCCCCTGCCAGCAAAGCACAGCTTCGATCACCAACTCAAAAACAAAAATACAAAAAAATATTAATTTCAAGGAGCATAGAAAGAACGAGAACAAGAAGCAGAGGCCTGTTCCAGAGCCTGAAGTAGCTAAACCAGTTGCTGAGATTAGAACCATAGCTGAACTTGCAGCTGAACTCCCAGTGGAACAATTAGAACCAGAAGACAGGAAGAGTATTGCTGTTCCTTGTGAAGATGATTGTACCGAGATCAGAACCATAGCTGAACTTGAACTCCCAGGGAAACATGAAGCAGATGACTCCGCAAATAGGATAGGAGAAGACTGTAAACAGAGCCCGAGTTCTTCAGGTGATGTTATGCTTCTAAAATCTGAACATGAAAGTGAAGCTACTTCTGCTGTAGAAGATCGTGACCAGAACAATGGTGGTGAAACAGAAAGCAAGGCCGATAAAGAGGGGGCTGAACTGAAATATTTGCTTTTAACCAGTCAATCATTTATTGGCCATGCAGAGGAGCTCCTCAATCTTGATGTGGATTGTCCTATGACCCTAAAAAAATATGAAAGTAGTGGGATAGCCAATCTCAGACTCTATTTGGATTGTGCAAATGAACTCACTGAGCGTAAAAGCCTACAAGATTCACAAATTGTTCATCCATTCTTGCTAACAAGTGCGGGTTATTCAAGATTACAGATCACTTTGATGAGGTTGGTTGAAGAAATCTATAATGGCATTGAGAATCTGAAATTTTACTCTATAGTTTCTGGGGAGAAATTTTCTGTAGATAATATTTATGCAATGATGAAGAGAGATTTGAAGTGCAATGGGCTGATAAATGGAATATGGGAGTGGGGTTGGAGGCATGGATTTTCTGCAGATGAAGCTGAGCAAGTTGTCAATGAAGTAGGGAGCTTAATTTTAAGTGGGTTGATTGAAGAGCTTATCATAAATTTATGA 2565 0.4097 MHRHRFASLVDLSLLELISMTLGNIPQDLVMYRSFMTCDDPKGVVECGTIRKSKSGSQKMKGKIKSQRTAENFETSLPNKSDKQEIVLKGSTEKSCDPSSLQLMEVSRGAQRLNNMIDSWSRGLNHDGRSEDIAKDLLKGALDLQESLVMLHRLQEASQHMHMSRLKKEQNEKPERGRIDAEKIDGKHTNQCREQSYPMGFQRPRPSADGSSRNCNEELKRVIKDSLVRQNLFPATTTEGLDSASEIPSTSSSQSSGVHTDKLSDSSFSSTTSKKVRGPNLVAKLMGLEEFPSRPFPAAVQKQLQGEKILNQKRPMFEIDMPKVRKTNSIIEKVDPERKKTLREILETVHFKGLLKKSSVRESRLQIHHRFYDSHSTHCDNLPPIVLMKPRYSLHHESLNTHGLVHPEELSLRKLKTEAVPSKSIKHKQGSTSMGNKTEEDVTKRLTQEEKPKLLKESVKLVEKEVKPIKKSPIKFSHKPQEREAIVTKAKVKTITRKPPEKEIFKPRIVARSQDQREITPTKYRTPPSGSRIKKNEIPCQQSTASITNSKTKIQKNINFKEHRKNENKKQRPVPEPEVAKPVAEIRTIAELAAELPVEQLEPEDRKSIAVPCEDDCTEIRTIAELELPGKHEADDSANRIGEDCKQSPSSSGDVMLLKSEHESEATSAVEDRDQNNGGETESKADKEGAELKYLLLTSQSFIGHAEELLNLDVDCPMTLKKYESSGIANLRLYLDCANELTERKSLQDSQIVHPFLLTSAGYSRLQITLMRLVEEIYNGIENLKFYSIVSGEKFSVDNIYAMMKRDLKCNGLINGIWEWGWRHGFSADEAEQVVNEVGSLILSGLIEELIINL 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2257 854 MobiDBLite consensus disorder prediction 560 576 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 630 685 - -
Glsi01g2257 854 Coils Coil 847 854 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 643 657 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 560 580 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 162 214 - -
Glsi01g2257 854 PANTHER OS01G0228800 PROTEIN-RELATED 28 852 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 238 275 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 418 445 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 162 190 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 515 535 - -
Glsi01g2257 854 MobiDBLite consensus disorder prediction 658 685 - -
Glsi01g2257 854 Pfam DUF761-associated sequence motif 269 293 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2257 Glsi-ChrGlsi01 85432258 85436409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2257 692 851 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.738 2.32e-19 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g2257 01 85432258 85436409 Glsi01g2257 01 85432258 85436409 ECH