Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2244 ATGGATAACCGACTCAAAATGCGAATCTGTCGCATGTTCCGATCCTCATTCGGGTCTTGCCGGACCCGAAACTTCACTGATGTGATGGAAAAAGCAGTCTTTACTCCACAGAAGGAACGGGGTTTCCAACTGATCGAGCCCCTGTCCCCTAAAGTTCGTCCTTTTCCATCTATCTGCAGACCCAAAGGCTCCGAAACATCTATTCTTTCGGTTAAGGATTCGCTCCCGAGACGAAATGTTTCGGAGTGGCCATCGCCGTTCTTCTGGGGCGATCTCGATGGTAGTTCTTGCCCTCCCACTTTTTCTATCTACGAAAACGAGTTCGGTTTTGATGAGAAAATGAAAAATTCAGCGAGAAACAAGAAGAATAAGACGAAAAAGAAGAAGAATGCCCAGAAGAAAAACAAGCCCAGAGATTTATTCCCATTTAGCTCTAGTACTAAAGACTCAAACTTTGGCGGGCATTGGTGGTATAGCAGCGACGAAGAAGACGATGAGACTGACACCCTTTTCTCTTCTAAAAGCACCTCTTCGGATTCCTCACGGTCTCGCCGCCGGCATCGTTCTCGTCGGAAAAAGCACGGCTGTAGCCGGGTGACTTCTGAGAAACGGAGCTCTGAAATGGGTATTCTGCCGTTGCAGGGGAAGGTGAAGGATACCTTCGCCGTAGTGAAGCGTTCGAGTGATCCTTACAATGATTTTAGGACGTCAATGGTGGAAATGATAGTTGAGAAACAGATATTTGCAGCCAGGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCACTGAATTCGTATCATCATCACAAGATCATCGTTGAAGTTTTCACAGAGATTTGGGAAGCTCTGTTCTCTGAATGGCTTTAA 867 0.4625 MDNRLKMRICRMFRSSFGSCRTRNFTDVMEKAVFTPQKERGFQLIEPLSPKVRPFPSICRPKGSETSILSVKDSLPRRNVSEWPSPFFWGDLDGSSCPPTFSIYENEFGFDEKMKNSARNKKNKTKKKKNAQKKNKPRDLFPFSSSTKDSNFGGHWWYSSDEEDDETDTLFSSKSTSSDSSRSRRRHRSRRKKHGCSRVTSEKRSSEMGILPLQGKVKDTFAVVKRSSDPYNDFRTSMVEMIVEKQIFAARDLENLLQCFLSLNSYHHHKIIVEVFTEIWEALFSEWL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2244 288 MobiDBLite consensus disorder prediction 181 198 - -
Glsi01g2244 288 MobiDBLite consensus disorder prediction 168 204 - -
Glsi01g2244 288 ProSiteProfiles OVATE domain profile. 223 282 IPR006458 -
Glsi01g2244 288 MobiDBLite consensus disorder prediction 114 146 - -
Glsi01g2244 288 Coils Coil 114 135 - -
Glsi01g2244 288 Pfam Transcriptional repressor, ovate 227 284 IPR006458 -
Glsi01g2244 288 NCBIfam uncharacterized plant-specific domain TIGR01568 221 284 IPR006458 -
Glsi01g2244 288 MobiDBLite consensus disorder prediction 119 134 - -
Glsi01g2244 288 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 111 285 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2244 Glsi-ChrGlsi01 85378759 85379625 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi01g2244 Ovate 2e-25 No_clan