Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2239 ATGAGCGTGATGGGGAGACAGATGCCGCGATCTAATTCGGCAGTGCACCATCAGCGTCAGAATTCTGACAACTTCCTCGACGCGACCTCTCGTGGAAGATGGTTTCAATCATCCACGTCGACGCAGGAGTTTGGGTCTTATGGTGGAGGAGTACTACAGGGGTTGATTGGGTCTCGATCTTCCAGCTTGAGGAAGAACGATGATGATCAAGTATTGCCCAGTGGGCTTACCCATGGCCTTCTTGATCTGCATTCCTTTAATACGGAGCTTTTACCTGAGATGTCTAATATTCGTGATGAATATCTAATCAATCATCATGTTCGTGGTCGAAGTTTTGATGACTCGGAGCCATTTGCTTCCACCAACAGACCTTTAAACAAATCTCGGGGATTGCCCGAGAACAGTCTTCTTAAAAGTCTCTCAACAGATAAAGAGAGAGCAAACAACGTTGCTAAGATCAAAGTTGTGGTTCGCAAGAGACCGCTAAATAAGAAAGAAATAGCAAAGAAAGAGGAAGATATTATTACCATAGATTCAAATTCTCTCACAGTTCATGAAAGGAAACTCAAGGTTGACTTAACAGAATATGTTGAGAAACATGAGTTTTTTTATGATGCTGTGCTGAACGAAGATGTTTCAAACGAGGAAGTTTATTCTGAGACTGTGGAACCCATTGTTCCTCTGATTTTTCAACGAACGAAAGCAACTTGCTTTGCATATGGCCAAACGGGGAGTGGAAAGACTTATACTATGCAACCACTGCCTCTCAAAGCATCCCAAGATATTTTAAAATTAGTGTACCATACATACCGGAACCAAGGTTTCCAATTGTTTGTTAGTTTCTTTGAGATATATGGGGGGAAACTATTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGGAAACAACAGGTTTGCATTGTTGGCTTGCAAGAATACAGAGTATCCGATGTTGAGACCATCAAGGATCTTATTGAGAAAGGAAATGCTACAAGAAGTACTGGTACAACTGGTGCAAATGAGGAATCCTCTCGATCACATGCTATACTTCAGCTTTGTATCAAAAGATCAGTTGATGGTACTCAATCGAAGCCTGCTCGAGTTGTAGGCAAGCTATCTTTTATAGATCTTGCTGGAAGTGAACGCGGCGCAGATACCACCGATAACGATAAGCAGACAAGGATTGAAGGTGCTGAAATTAATAAAAGCTTACTTGCTCTGAAGGAATGCATTAGAGCTCTTGACAATGACCAGGGGCATATTCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTGCGAGATTCATTTGTTGGTGATTCCCGCACGGTAATGATATCGTGTATTTCACCAAGCTCAGGTTCATGTGAGCATACTCTGAACACATTAAGATATGCTGACAGGGTGAAGAGCTTGTCAAAGGGGAACAGCTCAAGAAGGGATCCCTTTTCTTCATCCTCAAACCTTAGAGACTCAACTGTATTTCCTTCGTCTTCAGTTTTATCTCTTGATGATACCCCAGAGGACGAAATTAATTATATTTCCAGTGACAAGAACCGATTTGGTTGGTCCAAACAGCTTGAAAGTGAGCCCTCTCCTCCAGTCAATATGGATCGTGTTCCTAGTGGTAGGATGGGGACAAATTTGGCTGCATCTGTGTATTCTGACCAACAAAGGGTTCAAAGAGGTGGTCAAAATGGCAAAAATGAAGCTGATTACCTTAAGCCGACATATGAACAAGACAGAACAAGAAAGACCAGTAAGAAGGTTGATACCAACCAATTAGCAGCTGTGGAGGGCAATATATTCCCTCACGTGAAACGTATAGATCTGCCAAAGGCTAATAATCCTGATGATGATTTAAATGCCCTGTTGAAGGAAGAGGAAGATCTTGTAACAGCTCACAGGAGACAAGTGGAGGAGACAATGGACATTGTTAGGGAGGAGATGAATCTACTCGTTGAAGCTGACCAACCAGGAAATCAACTAGATGATTATATTTCCAAATTGAATGCCATTTTGTCACAAAAGGCTGCAGGAATTCTTCAACTGCAGACGCAATTGGCTCAATTTCAAAGACGTTTGAATGAGTACAATGTCTTGGTGTCTTCTGGTAACTGA 2130 0.4192 MSVMGRQMPRSNSAVHHQRQNSDNFLDATSRGRWFQSSTSTQEFGSYGGGVLQGLIGSRSSSLRKNDDDQVLPSGLTHGLLDLHSFNTELLPEMSNIRDEYLINHHVRGRSFDDSEPFASTNRPLNKSRGLPENSLLKSLSTDKERANNVAKIKVVVRKRPLNKKEIAKKEEDIITIDSNSLTVHERKLKVDLTEYVEKHEFFYDAVLNEDVSNEEVYSETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILKLVYHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKDLIEKGNATRSTGTTGANEESSRSHAILQLCIKRSVDGTQSKPARVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPFSSSSNLRDSTVFPSSSVLSLDDTPEDEINYISSDKNRFGWSKQLESEPSPPVNMDRVPSGRMGTNLAASVYSDQQRVQRGGQNGKNEADYLKPTYEQDRTRKTSKKVDTNQLAAVEGNIFPHVKRIDLPKANNPDDDLNALLKEEEDLVTAHRRQVEETMDIVREEMNLLVEADQPGNQLDDYISKLNAILSQKAAGILQLQTQLAQFQRRLNEYNVLVSSGN 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2239 709 PANTHER KINESIN-RELATED PROTEIN 6 68 704 IPR027640 GO:0003777|GO:0007018
Glsi01g2239 709 Coils Coil 684 704 - -
Glsi01g2239 709 CDD KISc_KIF2_like 152 473 - -
Glsi01g2239 709 ProSiteProfiles Kinesin motor domain profile. 152 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g2239 709 Pfam Kinesin motor domain 158 474 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g2239 709 MobiDBLite consensus disorder prediction 1 21 - -
Glsi01g2239 709 ProSitePatterns Kinesin motor domain signature. 374 385 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi01g2239 709 PRINTS Kinesin heavy chain signature 375 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g2239 709 PRINTS Kinesin heavy chain signature 425 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g2239 709 PRINTS Kinesin heavy chain signature 232 253 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g2239 709 PRINTS Kinesin heavy chain signature 341 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g2239 709 MobiDBLite consensus disorder prediction 115 133 - -
Glsi01g2239 709 MobiDBLite consensus disorder prediction 479 504 - -
Glsi01g2239 709 SMART kinesin_4 150 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g2239 709 Gene3D Kinesin motor domain 133 478 IPR036961 -
Glsi01g2239 709 FunFam Kinesin-like protein 133 478 - -
Glsi01g2239 709 Coils Coil 639 659 - -
Glsi01g2239 709 MobiDBLite consensus disorder prediction 475 504 - -
Glsi01g2239 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 475 IPR027417 -
Glsi01g2239 709 MobiDBLite consensus disorder prediction 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2239 Glsi-ChrGlsi01 85344272 85348261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2239 151 475 Calmodulin-binding Proteins AT5G65930 34.925 9.43e-44 168