Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2231 ATGGAATGGAACCCATTCCCTCGTCTTAATTCCACTTACCAAACATTTCCTAAAGAAGATGTTGTCGCTGTGAAGGCGGCACGTGCATTCGATTCTGGTCCACGGCCCGGCATGACCGGCTCTCTATTCTTCTACGTTACTTATGCGGGTGCTGCTGATGAAATTCGTGGAAAGCCTGCTTTGGCTGCTGACTGCACCATGCTCCTCAAGCCTGCTGAGCAAACACCTCTTTCTACTCTCTTTTATGCTCACCTTTCTAAGCTGGCGGGTATTCCAGATGGGGTGCTCAATGTGGTACCTGGGTTTGGCCAATCTGCTGGGGCTGCAATAAGCTCCCATATGAACATTGATGCCGTAGTTTTCATTTATGTGTTTATAGGTGAGTTCTACTGGTTCAACCGAAACGGGTTGTCAAATAATGCAGGCCGCAGCAAGAGTAATTTGAAATTTGTTTTGCTGGAATTAGGAGGTAAGTCAGCCCTCATAATTTTCAATGATGCTGATATTGACAAAGCTGTTGACCTTGCTCTCTTTGGCATCCTAATCAACAAAGTAAAATTGCGTTCAGGAATTAATGAGAAATCTGAGAAGAAGGTGGTGGAGAAGGCAAAAGCTTGGGTAGGAGGGGACCCCTTTGGTCCTAAAGTTCAGCAAGGACCCCAGGTTGACAAGAAGCAATTTGATAAAATTCTTTCCTATATTAAGCATGGAAACAGAAAAGGAGCTACCCTATTGACTCGAGGCAAGCCAGTGGGTAACAAGAGCTACTACAATGAACTTACAATTTTCATCGACGTTAAGGAGGACATGGTAATAGCACAAGATGAAATATTTGGACCTGTGATGGCACTTTCAAGTTCAAGTGAGTTCATTATTGTATATTCCTTTTTTACTGTGAATGTGTACTTGAATGTTGAACACAGTATCTATATGAACAACAGGAGCATTGAGGAAGCAATTAGGAGTGCTAACAATACCAGATACGGCCTAGCAGCAGGGATTGTGAATAAGAACTTGGATATAGAGAACAAAGTGTCAAGGTCCATTCGTGCAGGCATCATTTGGATTAACTGCTATTTTGCCTTTGATAGTGGCTACCCTTATGGAGGGTATAAGATGAGCGGATTCGGAAGAGATTATGGAATGGAAGCCCTTCACAAGTATCTTCAAGTTAAATCTGTTGTAACGCCCATTTACAATTCTCCTTGGCTTTGA 1215 0.4296 MEWNPFPRLNSTYQTFPKEDVVAVKAARAFDSGPRPGMTGSLFFYVTYAGAADEIRGKPALAADCTMLLKPAEQTPLSTLFYAHLSKLAGIPDGVLNVVPGFGQSAGAAISSHMNIDAVVFIYVFIGEFYWFNRNGLSNNAGRSKSNLKFVLLELGGKSALIIFNDADIDKAVDLALFGILINKVKLRSGINEKSEKKVVEKAKAWVGGDPFGPKVQQGPQVDKKQFDKILSYIKHGNRKGATLLTRGKPVGNKSYYNELTIFIDVKEDMVIAQDEIFGPVMALSSSSEFIIVYSFFTVNVYLNVEHSIYMNNRSIEEAIRSANNTRYGLAAGIVNKNLDIENKVSRSIRAGIIWINCYFAFDSGYPYGGYKMSGFGRDYGMEALHKYLQVKSVVTPIYNSPWL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2231 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 159 286 IPR016163 GO:0016620
Glsi01g2231 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 365 IPR016163 GO:0016620
Glsi01g2231 404 Pfam Aldehyde dehydrogenase family 59 285 IPR015590 GO:0016491
Glsi01g2231 404 Pfam Aldehyde dehydrogenase family 314 394 IPR015590 GO:0016491
Glsi01g2231 404 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 286 - -
Glsi01g2231 404 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 153 160 IPR029510 GO:0016491
Glsi01g2231 404 SUPERFAMILY ALDH-like 59 400 IPR016161 GO:0016491
Glsi01g2231 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 366 394 IPR016162 GO:0016491
Glsi01g2231 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 158 IPR016162 GO:0016491
Glsi01g2231 404 FunFam Aldehyde dehydrogenase, putative 366 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2231 Glsi-ChrGlsi01 85314663 85316806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2231 59 404 Aldehyde Dehydrogenase Gene Family AT3G24503 55.679 1.47e-130 383