Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2227 ATGGCTAGCATTCCTAACGGCCAACCTGAGATCCCCACCATCAAGTTCACCAAGCTCTTCATCAATGGCCAATTTGTTGATTCCATTTCAGGAAAAACGTTTGAGACAAGAGATCCAAGAACAGGGGAAGTGATTGCGAGGATCGCAGAGGCTACCGAAGAAGATGTGGATATTGCTGTCAATGCGGCTCGCCACGCCTTTGATTTCGGTCCATGGCCGCGTTTGTCCGGCGTGGCGAGAGCAAAAATTATGATGAGATGGGCAGAGCTAATTGATGAACACGCAGCAGACATAGCAGCATTAGAAGCCATTGATGCAGGTAAGCTATACCTTGTGTGCAAGGTTATGGAAATTCCTCTGATAACAAATATCCTACGTTACTACGCGGGTGCTGCTGATAAGATTCATGGAGAAGTATTAAAAATGTCCGGAGAGTTCCAAGCATATACACTTCTTGAACCAATTGGTGTAGTGGGACATATTATTCCCTGGAATTTTCCTAGCAGCATGTTCCTTAGCAAGGTTAGCCCTGCCTTAGCTGCTGGTTGCACCATGCTTCTCAAGCCTGCTGAGCAAACTCCTCTCTCTGCTCTGTTTCTTGCTCATCTTGCTAAGCTCGCTGGAATCCCAGATGGAGTGCTCAATGTAGTACCTGGTTTCGGTCACATTGCTGGTGCTGCAATAACCTCACATATGGACATTGATGCGGTCAGCTTTACGGGTTCAACAGAAGTAGGGCGTCAAGTAATGGAGGCTGCAGCTAGAAGTAATTTGAAATCAGTTTCACTGGAACTGGGAGGAAAGTCACCACTCATCATTTTTGATGATGCTGACGTAGACAAAGCCGTAGAGATTGCACTTTCGGGTTTCCTATTTAATAAGGGAGAAGTTTGTGCTGCAAGTTCTCGAGTGTTCGTTCAAGAAGGGATTTATGATGAATTTGAGAAGAAATTGGTGAAGATTGTGAAAGCTTGGGCACTCGGGGACCCTTTTGATCCCAAAGTTCAGCAAGGACCTCAGGTTGACAAGAAGCAGTTTGATAAAATTCTTTCGTATATTGAGCATGGAAAAAGAGAAGGAGCCACTCTGTTGGCTGGTGGTAAACCAGTAGGCGACAAGGGATACTACATTGAGCCAACTGTTTTCGCCAATGTTAAGGAGGACATGCGCATAGCACAAGAGGAAATATTTGGGCCTGTGGTGGCACTCTTCAAGTTTAAGAGTATTGAGGAAGCAATTAAGAGTGCAAACAATACAAAGTATGGGCTAGCAGCTGGGATAGTGACAAAGAACTTGGATATAGCAAACACTGTGTCAAGGTCGATTCGAGCAGGTTTTGTTTGGATCAATTGCTATCTTAACATAGAGGGCGACACTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAAGGATTTTGGAAATGAAGCCCTTCACAAGTACCTCCACGTTAAATCTGTCGTTACTCCTATTTACAATTCTCCTTGGCTTTGA 1494 0.4471 MASIPNGQPEIPTIKFTKLFINGQFVDSISGKTFETRDPRTGEVIARIAEATEEDVDIAVNAARHAFDFGPWPRLSGVARAKIMMRWAELIDEHAADIAALEAIDAGKLYLVCKVMEIPLITNILRYYAGAADKIHGEVLKMSGEFQAYTLLEPIGVVGHIIPWNFPSSMFLSKVSPALAAGCTMLLKPAEQTPLSALFLAHLAKLAGIPDGVLNVVPGFGHIAGAAITSHMDIDAVSFTGSTEVGRQVMEAAARSNLKSVSLELGGKSPLIIFDDADVDKAVEIALSGFLFNKGEVCAASSRVFVQEGIYDEFEKKLVKIVKAWALGDPFDPKVQQGPQVDKKQFDKILSYIEHGKREGATLLAGGKPVGDKGYYIEPTVFANVKEDMRIAQEEIFGPVVALFKFKSIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSIRAGFVWINCYLNIEGDTPFGGYKMSGFGKDFGNEALHKYLHVKSVVTPIYNSPWL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2227 497 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Glsi01g2227 497 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 21 277 - -
Glsi01g2227 497 Pfam Aldehyde dehydrogenase family 26 487 IPR015590 GO:0016491
Glsi01g2227 497 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 9 487 - -
Glsi01g2227 497 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Glsi01g2227 497 SUPERFAMILY ALDH-like 13 493 IPR016161 GO:0016491
Glsi01g2227 497 FunFam Aldehyde dehydrogenase, putative 459 485 - -
Glsi01g2227 497 CDD ALDH_F1-2_Ald2-like 17 488 - -
Glsi01g2227 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 456 IPR016163 GO:0016620
Glsi01g2227 497 FunFam Aldehyde dehydrogenase3 267 456 - -
Glsi01g2227 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 485 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2227 Glsi-ChrGlsi01 85272265 85276235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2227 10 497 Aldehyde Dehydrogenase Gene Family AT3G24503 66.667 0.0 698