Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2226 ATGGCTAGCATCCCTAATGGCCAACCTGAGATCCCCACCATCAAGTTCACCAAGCTCTTCATCAATGGTCAATTTGTTGATTCCATTTCAGGAAAAACGTTTGAGACAAGAGATCCAAGAACAGGAGAAGTGATTGCGAGCATCGCAGAGGCTACCAAAGAAGATGTGGATATTGCCGTCAATGCGGCACGCCACGCCTTTGATTTCGGTCCATGGCCGCGTTTGTCCGGCGTGGCGAGAGCAAAAATTATGATGAAATGGGCAGAGCTAATTGATGAACACGTAGCAGACATAGCAGCATTAGAAGCCATTGATGCAGGTAAGCTATACCTTATGTGCAAGGCTATGGAAATTCCTCTAATGACAAATATCCTACGTTACTACGCGGGTGCTGCTGATAAGATTCATGGAGAAGTATTAAAAATGTCCGGAGAGTTCCAAGCATATACACTTCTTGAACCAATTGGTGTAGTGGGCCATATTATTCCCTGGAATTTTCCTAGCAACATGTTCCTTAGCAAGGTTAGCCCTGCCTTAGCTGCTGGTTGCACCATGCTTCTCAAGCCTGCTGAGCAAACTCCTCTCTCTGCTCTGTTTCTTGCTCATCTTGCTAAGCTCGTAAGTATGCTGCCTCAAAATGCTTCTTTTACTTTTAAAACCACGGCTCTCACAATTTTTTCCCTTCTGAAGGCTGGAATCCCAGATGGAGTGCTCAATGTAGTACCTGGTTTCGGTCACATTGCTGGTGCTGCAATAACCTCACATATGGACATTGATGCGGTCAGCTTTACGGGTTCAACAGAAGTAGGGCGTAAAGTAATGGAGGCTGCAGCTAGAAGTAATTTGAAATCAGTTTCACTGGAACTGGGAGGAAAGTCACCACTCATCATTTTTGACGACGCTGACGTAGACAAAGCCGTAGAGATTGCACTTTCGGGTTTCCTATTTAATAAGGGAGAAGTTTGTGCTGCAAGTTCTCGAGTGTTCGTTCAAGAAGGGATTTATGACGAATTTGAGAAGAAATTGGTGCAGATTGCGAAAGCTTGGGTAGTCGGGGACCCTTTTGATGCTAAAGTTCAGCAAGGACCTCAGGTTGACAAGAAGCAGTTTGATAAAATTCTTTCGTATATTGAGCATGGAAAAAGAGAAGGAGCCACTCTGTTGGCTGGTGGTAAACCAGTAGGCGACAAGGGATACTACATTGAGCCAACTGTTTTCGTCAATGTTAAGGAGGACATGCGCATAGCACAAGAAGAAATATTTGGGCCTGTGGTGACACTCTTCAAGTTTAAGAGCATTGAAGAAGCAATTAAGAGTGCAAACAATACAAAGTATGGGCTAGCAGCTGGGATAGTGACAAAGAACTTGGATATAGCAAACACTGTGTCAAGGTCGATTCGAGCAGGTTTTGTTTGGATCAACTGCTATCTTAACATAGAGGGCGACACTCCTTTTGGAGGATATAAGATGAGCGGATTTGGAAAGGACTGCGGCATGGAAGGCCTTCATAAGTACCTCCAAGTTAAATCCGTTGTTACTCCCATTTACAATTCTCCCTGGCTTTGA 1566 0.4444 MASIPNGQPEIPTIKFTKLFINGQFVDSISGKTFETRDPRTGEVIASIAEATKEDVDIAVNAARHAFDFGPWPRLSGVARAKIMMKWAELIDEHVADIAALEAIDAGKLYLMCKAMEIPLMTNILRYYAGAADKIHGEVLKMSGEFQAYTLLEPIGVVGHIIPWNFPSNMFLSKVSPALAAGCTMLLKPAEQTPLSALFLAHLAKLVSMLPQNASFTFKTTALTIFSLLKAGIPDGVLNVVPGFGHIAGAAITSHMDIDAVSFTGSTEVGRKVMEAAARSNLKSVSLELGGKSPLIIFDDADVDKAVEIALSGFLFNKGEVCAASSRVFVQEGIYDEFEKKLVQIAKAWVVGDPFDAKVQQGPQVDKKQFDKILSYIEHGKREGATLLAGGKPVGDKGYYIEPTVFVNVKEDMRIAQEEIFGPVVTLFKFKSIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSIRAGFVWINCYLNIEGDTPFGGYKMSGFGKDCGMEGLHKYLQVKSVVTPIYNSPWL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2226 521 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 509 IPR016162 GO:0016491
Glsi01g2226 521 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 9 511 - -
Glsi01g2226 521 FunFam Aldehyde dehydrogenase, putative 483 509 - -
Glsi01g2226 521 SUPERFAMILY ALDH-like 13 517 IPR016161 GO:0016491
Glsi01g2226 521 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 291 480 IPR016163 GO:0016620
Glsi01g2226 521 CDD ALDH_F1-2_Ald2-like 17 512 - -
Glsi01g2226 521 FunFam Aldehyde dehydrogenase3 291 480 - -
Glsi01g2226 521 Pfam Aldehyde dehydrogenase family 26 511 IPR015590 GO:0016491
Glsi01g2226 521 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 315 326 IPR016160 GO:0016491
Glsi01g2226 521 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 287 294 IPR029510 GO:0016491
Glsi01g2226 521 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 21 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2226 Glsi-ChrGlsi01 85255002 85259011 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2226 10 521 Aldehyde Dehydrogenase Gene Family AT3G24503 64.522 0.0 699