Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2225 ATGGCTGGTGTCTCCGCTAATGGCCAACCTGATCAGATCCCCACCATTAAGTTCACCAAGCTCTTCATCAATGGACATTTTGTTGATTCCCTTTCAGGCAAAACATTTGAGACAAGAGATCCAAGAACAGGAGAAGTGATTGCCAGGATCGCAGAGGCTACTAAACAAGATGTGGATCTTGCTGTCAAGGTGGCGCGTGAGGCTTTTGATTTCGGTCCATGGCCACGGTTGCCCGGCACGGAAAGAGCAAAAATTATGATGAAATGGGCAGACTTAATTGATCAAAACATATCAGAGATAGCCGCATTAGATGCCATAAATGCAGGTAAGTTATATCATGTATGTAAGGCTGTGGAGATTCCTCGAGTTGCCAATGCCCTACGTTACTACGCTGGTGCTGCTGATAAGATTCATGGAGATGTATTAAAAATGTCCAAAGAGTTTCATGCATATACACTTCTTGAACCAATTGGTGTTGTGGGACACATCATTCCTTGGAATTTTCCTAGCAGCATGTTCTTCACCAAGGTTAGCCCTTCCTTGGCTGCTGGCTGCACCATGGTCCTCAAACCTGCTGAGCAAACACCCCTCTCTGCATTATTTTATGCTCATCTTGCTAAGTTGGCTGGAATCCCAGATGGAGTGCTTAATGTAGTGCCTGGGTTTGGCTCCATTGCTGGTGCTGCAATATCCTCACACATGGACATTGATGCGGTCAGTTTTACTGGTTCAACAGAAGTAGGGCGTCAAGTAGTGGAGGCTGCAGCTAGAAGCAATTTGAAATCAGTTTCACTGGAATTAGGAGGCAAGTCACCCCTCATAATTTTTGATGATGCTGATGTAGACAAAGCTGCGGGACTTGCACTTTCAGGCATCCTATTTAATAAGGGAGAAATCTGTGTTGCAAGTTCCCGTGTGTTCGTTCAGGAAGGGATCTATGATGAGTTTGAGAAGAAATTGGTGCAGATGGCAAAAGCTTGGGTAGTTGGGGACCCTTTCGATCCTAAAGTTCAGCAAGGACCTCAAGTTGACAAGAAGCAATTCGATAAAATTCTTTCCTATATCGAACATGGGAAGAGAGAAGGAGCCACCCTGTTGACTGGCGGTAAAGCTGTGGGCAACAAGGGATACTACATTGAGCCAACCATTTTCGCAGATGTTAAGGAGGACATGCGTATAGCAAAAGATGAAATATTTGGGCCTGTGTTGTCACTCTTTAAGTTCAGGAGCATTGAAGAAGCAATTAAGAGTGCAAACAATACCAGATATGGCCTAGCAGCAGGAATTGTGACCAAGAATTTAGATACAGCAAACACAATGTCAAGGTCAATTCGTGCAGGCATCGTTTGGATCAACTGCTATATGGTCTTTGAATTTGATGTTCCTTTTGGAGGGTGTAAGATGAGCGGATTTGGAAAGGATTATGGAATGGAAGCACTTCACAAGTACCTCCAAGTTAAATCCGTTGTAACTCCTATTTATAACTCTCCCTGGCTTTGA 1500 0.4413 MAGVSANGQPDQIPTIKFTKLFINGHFVDSLSGKTFETRDPRTGEVIARIAEATKQDVDLAVKVAREAFDFGPWPRLPGTERAKIMMKWADLIDQNISEIAALDAINAGKLYHVCKAVEIPRVANALRYYAGAADKIHGDVLKMSKEFHAYTLLEPIGVVGHIIPWNFPSSMFFTKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGSIAGAAISSHMDIDAVSFTGSTEVGRQVVEAAARSNLKSVSLELGGKSPLIIFDDADVDKAAGLALSGILFNKGEICVASSRVFVQEGIYDEFEKKLVQMAKAWVVGDPFDPKVQQGPQVDKKQFDKILSYIEHGKREGATLLTGGKAVGNKGYYIEPTIFADVKEDMRIAKDEIFGPVLSLFKFRSIEEAIKSANNTRYGLAAGIVTKNLDTANTMSRSIRAGIVWINCYMVFEFDVPFGGCKMSGFGKDYGMEALHKYLQVKSVVTPIYNSPWL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2225 499 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 23 289 - -
Glsi01g2225 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 6 489 - -
Glsi01g2225 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Glsi01g2225 499 FunFam Aldehyde dehydrogenase, putative 461 487 - -
Glsi01g2225 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Glsi01g2225 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Glsi01g2225 499 FunFam Aldehyde dehydrogenase3 269 458 - -
Glsi01g2225 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Glsi01g2225 499 SUPERFAMILY ALDH-like 14 495 IPR016161 GO:0016491
Glsi01g2225 499 Pfam Aldehyde dehydrogenase family 28 489 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2225 Glsi-ChrGlsi01 85248427 85251651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2225 12 499 Aldehyde Dehydrogenase Gene Family AT3G24503 69.734 0.0 726