Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2221 ATGGGTTCCATCAGCAATTCCGTAAACCCCGGGGCAGGCGTCGACAAACACAACCACGAGGTGAACTTCTCCGCCGGCAGAGGGTTTCCGACGAAACTAAAATTGGGATTGAAAGAAACACTCTTCCCCGACGACCCGTTCAGGCAGTTCAAGAATGAAGAGAAGCCAATGCGTAGGGTCATGAAAGGCGTTCAATACTTTATCCCAATCTTCGAATGGCTTCCCACTTACAATTTTCGCCTCTTTTTCTCTGACGTTCTCGCCGGCATCACTATCACAAGTCTTGCTATCCCTCAAGGCATTAGCTATGCTAAACTCGCTGGCATTCCTCCCATCATTGGCCTCTATAGTAGTTTTGTTCCACCTCTTGTGTATGCCGTTTTCGGGAGTTCAAGGCAGATGGCGGTGGGAACAATAGCAGCGGCCTCACTGCTTATATACCAAACTATCTCAAGCGTGGTAAAGCCAGAAGACGATCCAGCGTTGTACCTTCATTTGATTTTCACAACTACCTTCATCACCGGCGCCTTCCAGACTGCTTTAGGTTTTCTAAGGTTGGGTATATTAGTGGATTTCTTTTCCCATTCTACCATCACTGGCTTCATGGGAGGGACAGCGGTAATTCTGTGTCTCCAGCAGTTGAAGGGCATATTTGGCTTGCAACATTTCACCACTAAAACAAGTGTCCAAGACGTGGTGAAGTCCATCTTGACCAATAGAAATGAGATAAGGTGGGAGACCACAGTTCTTGGTGCGATCTTCCTTGCTTTCTTGCAGTTCACTAGATACCTGAAGCAGAGAAATCCGAAACTCTTTTGGGTATCAGCTATAGCTCCAATAACAACAGTGGTAGTGGGCGGTGTTTTTACGTACCTTGTCAAAGGTCAAGATCATGGAATTCAAACAGTGGGTCACCTAGATCGAGGATTAAATCATCTATCCATCCAGTATTTGAACTTTGATTCTAAATATTTACCAACAGTGTTGAAAGCTGGCCTTGTCACCGGCATTTTGTCATTGGCGGAAGGGATAGCAATAGGAAGAAGCTTTGCTGTGGTTGAAAATACCCCTCATGATGGGAACAAGGAAATGATTGCTTTTGGCTTTATGAATCTGTGCGGCTCTTTCACTTCATGTTACTTGACTAGTGGACCATTTTCCAAAAGCGCAGTGAATTACAACGCAGGGTGTAAGACAGCTATGTCCAACGTAGTACAATCTTGTTTAATGGCACTCACGCTCCAATTTTTGGCTCCTCTGTTTGGTTACACCCCCCTTGTGGCTCTTTCTGCTATAATTATGTCTGCAATGCTGGGTCTTATAGACTATTCGGAGGCTTTCCATCTCTTCAAGGTCGACAAGTTTGACTTTGTAATTTGCATGTCTTGCTTCTTAGGAGTCAGCTTTATTAGCATGGACGTCGGCCTCTTTTTGTCCGTTGGACTTGGCGTGCTTAGAGCACTTTTATACGTGGCTAGACCAGCCACATGCAGGCTTGGAAAGGTGCCCGACTCATCTTTATATCGAGACGTGGAGCAATATCCAACCTCAGCAATCCCGGGAGTTCTAATCCTTCAGCTTGGTTCTCCTATCTACTTTGCAAATTCTTCCTATGTCAAAGAAAGGATTTTGAGGTATATTCGAAGCGAGCAGAGCTCGAGTGGAAATAGTGTAGAGCATATTATCCTGGATTTATCAGGAGTGACATCCGTCGACATAACTGCTATTGAAGGACTATTGGAGGCACGTAAAATCTTGGAAAAAAATTATGGAGCGCAGATATCATTTGTAAACCCAAGGATGGAGGTTATGGAGAAGCTAGTAGCATCGAAGTTTGTTGAAAAGGTTGGGAAGGAGTCGTTCTTTTTGAGTTTGGATGATGCGGTGGCAGCAAGTCAATATCAGCTTCGTATATTGAAGACAAATGGTGCTGAAGAATCAGCTCAATAA 1950 0.4462 MGSISNSVNPGAGVDKHNHEVNFSAGRGFPTKLKLGLKETLFPDDPFRQFKNEEKPMRRVMKGVQYFIPIFEWLPTYNFRLFFSDVLAGITITSLAIPQGISYAKLAGIPPIIGLYSSFVPPLVYAVFGSSRQMAVGTIAAASLLIYQTISSVVKPEDDPALYLHLIFTTTFITGAFQTALGFLRLGILVDFFSHSTITGFMGGTAVILCLQQLKGIFGLQHFTTKTSVQDVVKSILTNRNEIRWETTVLGAIFLAFLQFTRYLKQRNPKLFWVSAIAPITTVVVGGVFTYLVKGQDHGIQTVGHLDRGLNHLSIQYLNFDSKYLPTVLKAGLVTGILSLAEGIAIGRSFAVVENTPHDGNKEMIAFGFMNLCGSFTSCYLTSGPFSKSAVNYNAGCKTAMSNVVQSCLMALTLQFLAPLFGYTPLVALSAIIMSAMLGLIDYSEAFHLFKVDKFDFVICMSCFLGVSFISMDVGLFLSVGLGVLRALLYVARPATCRLGKVPDSSLYRDVEQYPTSAIPGVLILQLGSPIYFANSSYVKERILRYIRSEQSSSGNSVEHIILDLSGVTSVDITAIEGLLEARKILEKNYGAQISFVNPRMEVMEKLVASKFVEKVGKESFFLSLDDAVAASQYQLRILKTNGAEESAQ 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2221 649 Pfam Sulfate permease family 82 461 IPR011547 GO:0016020
Glsi01g2221 649 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Glsi01g2221 649 PANTHER SULFATE TRANSPORTER 38 635 IPR001902 GO:0016020|GO:0055085
Glsi01g2221 649 Pfam STAS domain 517 628 IPR002645 -
Glsi01g2221 649 CDD STAS_SulP_like_sulfate_transporter 518 625 - -
Glsi01g2221 649 Gene3D STAS domain 493 635 IPR036513 -
Glsi01g2221 649 NCBIfam sulfate permease 69 628 IPR001902 GO:0016020|GO:0055085
Glsi01g2221 649 SUPERFAMILY SpoIIaa-like 513 631 IPR036513 -
Glsi01g2221 649 ProSiteProfiles STAS domain profile. 512 632 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2221 Glsi-ChrGlsi01 85217004 85221512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2221 21 640 Inorganic Solute Cotransporters AT5G19600 65.113 0.0 804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g2221 01 85217004 85221512 Glsi01g2221 01 85217004 85221512 ECH