Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2218 ATGCCTCCTGAGATGAAGAAGAAGGTCTACTCAAACCCTCTTTTGCATTTCCCACTTCTCATTGCCTTTTTCCTAGGCACACTATCTCTCTGCGCCTCCAACCAGGCCCCCATTACCGGCCATGGAGCTCTCACTGATGCTGAAGCCATGTACATCAGGCAACGTCAGCTTCTTTACTACAGGGATGAGTTCGGTGACAGAGGAGAGGAAGTTACTGTCGACCCATCTCTGGTTTTCGAGAATGATCGTATCAGAAATGCTTATATAGCCTTACAAGCTTGGAAGCAAGCCATTCTTTCTGATCCGCAAAATCTTACTGCCAATTGGGTTGGACCCAAGATCTGTAACTACACTGGGGTTTTCTGTGCTCCTGCACTGGATAACCCCAAGATTAGGACAGTCGCCGGTATTGATCTCAACCATGGTGACATTGCTGGCTATTTGCCGGAAGAGCTTGGACTACTCGTGGATCTAGCCCTCTTCCATATCAACTCCAACAGGTTCTGTGGTACTGTACCTCACAAGTTTGATAGACTAAAACTGCTCTTCGAACTGGATCTCAGTAACAATAGGTTCGCCGGGAAGTTCCCGGAGGTGGTCCTGAGGCTTCCTGCTCTCAAATTCTTGGATCTGAGATTCAACGAATTTGAAGGGACAGTGCCCAGAGAGCTTTTTGACAAGGATTTGGACGCGATCTTCATTAACAGCAATCGCTTTGTGTTCGATCTTCCAGACAATTTTGGGAACTCGCCGGTGTCAGTCATCGTTCTCGCTAACAACAGGTTCCATGGCTGCGTCCCTGCGAGCTTGGGCAACATGTCAAACCTCAATGAGATCATTCTGATGAACAATGGATTCCGTTCGTGCTTGCCTTCAGAAATTGGGTTGCTGAAGAACTTGACAGTGTTTGATGTGAGCTTCAATCAGCTATTGGGTCCCTTGCCAGACACCATTGGAGGTGTGGTGAGCCTTGAGCAGCTGAATGTAGCTCACAATATGCTTTCTGGGAAAATTCCAGCGGCGATTTGTATGCTACCCAATCTTCAGAACTTCACGTATTCATATAACTTCTTCACTGGTGAGCCGCCGGCGTGTCTGAGCTTGCCGTCGTTTGATGACCGGAGGAACTGCTTGCCGGCGAGGCCGGTACAGAGGTCAGCGGCACAATGTAAGTCGTTCTTGTCTCGGCCTGTGGATTGTAACTCGTTTAGATGTAAACCATTTGTTCCTTCGTTGCCTTCCCCTCCACCTCCTTCCCCTCCTATCCCTGTTCCCTCACCCCCAGTTGTTGTTCCTTCACCACCTCTACAATCATCACCTCCTCCACCTGTTTCCATTCCACAATCTCCGCCGCCACCACCTCCAGTTTACTCTCCACCTCCTCCCCCCACTTTGCCCCCACCACCTCCTCCACCTCCACCACCGCCTCCGGTCTATTCCCCACCCCCTCCCCCGCCAGTCTATTCTCCACCACCTCCTCCGCCAGTCTATTCTTCACCGCCTCCTCCACCATCTCCGTCTCCACCCCCACCATCTCCGTCTCCACCCCCACCATCTCCCCCGCCACCTTCACCTCCACCACCTGTGGTATCACCACCTCCACCATCGCCTCCCCCTCCATCTCCCCCAACCTCACCAACTCCAACGCCACCATATTGTGTCCGGTCTCCACCCCCTCCACCACCAAATTCGCCACCTCCACCGGCTCCTATATTCTCCCCACCCCCTCCAACGCCTTACTATTACAGCTCTCCACCCCCGCCACCGCCACCACATCATTCGCCTCCACCACCTCCTCACTCACCTCCGCCGCCTATTTATCCCTATTTATCACCGCCACCTCCTCCTCCTGTCCATTCTCCTCCTCCCCCACTCCATTCACCACCACCACCACCACCTTGTATAGAACCACCACCACCACCACCACCTTGTATAGAACCACCACCACCCCCACCATCCCCACCACCTTGTGAAGAGCATTCGCCGCCTCCACCTTCACCCACTCCTTATCTGCCACCCCCATCCCCATCTCCCCCGCCACCACCGGTATATCCTTCCCCATCTCCCCCGCCACCGCCGGTATATGCTTCCCCACCGCCCCCGGTTCACTATAGTTCCCCGCCTCCCCCTGTTCATTACAGTTCCCCTCCATGCGAAACTCCGCCACCATCTCCATCACCACCTCCACCAATTATATACGGAAGCCCACCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTTCGGAGTTTCATACGCATCTCCACCTCCACCACCCTTCTATTGA 2292 0.5362 MPPEMKKKVYSNPLLHFPLLIAFFLGTLSLCASNQAPITGHGALTDAEAMYIRQRQLLYYRDEFGDRGEEVTVDPSLVFENDRIRNAYIALQAWKQAILSDPQNLTANWVGPKICNYTGVFCAPALDNPKIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPEVVLRLPALKFLDLRFNEFEGTVPRELFDKDLDAIFINSNRFVFDLPDNFGNSPVSVIVLANNRFHGCVPASLGNMSNLNEIILMNNGFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGVVSLEQLNVAHNMLSGKIPAAICMLPNLQNFTYSYNFFTGEPPACLSLPSFDDRRNCLPARPVQRSAAQCKSFLSRPVDCNSFRCKPFVPSLPSPPPPSPPIPVPSPPVVVPSPPLQSSPPPPVSIPQSPPPPPPVYSPPPPPTLPPPPPPPPPPPPVYSPPPPPPVYSPPPPPPVYSSPPPPPSPSPPPPSPSPPPPSPPPPSPPPPVVSPPPPSPPPPSPPTSPTPTPPYCVRSPPPPPPNSPPPPAPIFSPPPPTPYYYSSPPPPPPPHHSPPPPPHSPPPPIYPYLSPPPPPPVHSPPPPLHSPPPPPPCIEPPPPPPPCIEPPPPPPSPPPCEEHSPPPPSPTPYLPPPSPSPPPPPVYPSPSPPPPPVYASPPPPVHYSSPPPPVHYSSPPCETPPPSPSPPPPIIYGSPPPAPVYEGPLPPVFGVSYASPPPPPFY 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2218 763 Gene3D Ribonuclease Inhibitor 88 251 IPR032675 -
Glsi01g2218 763 MobiDBLite consensus disorder prediction 645 690 - -
Glsi01g2218 763 PRINTS Proline rich extensin signature 437 453 - -
Glsi01g2218 763 PRINTS Proline rich extensin signature 459 476 - -
Glsi01g2218 763 PRINTS Proline rich extensin signature 416 437 - -
Glsi01g2218 763 MobiDBLite consensus disorder prediction 709 737 - -
Glsi01g2218 763 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 25 525 - -
Glsi01g2218 763 SUPERFAMILY L domain-like 88 371 - -
Glsi01g2218 763 MobiDBLite consensus disorder prediction 429 611 - -
Glsi01g2218 763 FunFam Leucine-rich repeat extensin-like protein 5 250 389 - -
Glsi01g2218 763 FunFam Leucine-rich repeat extensin-like protein 1 88 249 - -
Glsi01g2218 763 Gene3D Ribonuclease Inhibitor 252 392 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2218 Glsi-ChrGlsi01 85186707 85188998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2218 1 405 Trihelix Transcription Factor Family AT4G18670 72.906 0.0 632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g2218 01 85186707 85188998 Glsi01g2218 01 85186707 85188998 ECH