Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2212 ATGTTTGTTCCTGCCCTTATATTCATCTACCAAAAAAAAAAATCAGAAAAGTACTTTAGCATATTCACATGTTCATATCTATATATGATGAATGATGTTCGTATTACTAAAAATATTCATCTTAACCTTCACAGCCTCATCTCGCGTCCATACGCCGTCAACAGCGTCGTGGTTCTTCAACAGCACTGCATCCCCGATGATTTTGGGAACTGGTTGAAGCGGGGAAGCTCGTACAAGTTCCCCTCTCTCTCAAACCAACTAACAACTAAGAAGTTTCTGTTTGGATTCATGTTCTTGCGGAGCAAATTTCTGGGCTTTGCTCCATGGAAACCCTTGATTCGTTGTCTCCATTCTCCTAAGGAGTCGCTGCATTGTATACTTGAAGATGCTGCCCTAGTATCAGATCTTTCAAGATCTCTCTTATCTTCTTTTTCATGGATAACTTGCAATCTGGCTGTTTTAATCAAGATTTGTGCAGTGGGACTGGAGGAACTTGATTCCAGGCCTTTCCCTTTGCAGTTTTCAATTTTTCTTCTATTTCCACCAGAGACTTACTTTGCATTTGTTTGTTATTGGTGTCCAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTACAAAGCACTCCAGAGAAAAATGGTCATTCAGATGATGCTTCCAGAAGTCCTGAACTTCTTCAAGAGTTCTTGAAATCTGGTCCAAAGAAGGAACTTCTTCGAACGTGCTTCGATAAGGACCGAAAGAACATTTTATCTAAAAGGAGGATGTCAGAAACTAAGTCAACCAGTAAGCTAAGCAAGAAACAGGACAGCAAAAAAGTTTCTAGTCTCAGCAACCAGCAGCCCTCTAGGAAACAACATAGGAAGGGCAAAAACCCCACAAGATTCCTGCCAGCTCCTGACCACCCTTCTGATCTTGGACATTCAAACTCATGGATCTGTAAAAATCCTGCTTGTAAAGCTGTTCTCTCTATAGATAACACATTTTGTCGAAGGTGTTCTTGCTGTATTTGTCACCTTTTTGATGTTAACAAGGATCCTAGTCTTTGGTTGGTATGTTCATCTGAATCTGCTAAAGGGGACTGCTGTGGGGTGTCTTGCCATATTGAGTGTGCCCTTCAACATGAAAAAGTGGGAGTTTTTGATCATGGGCAACTGATGCAACTAGATGGTGATTATTGTTGTGTATCCTGTGGTAAAGTTACAGGGATACTTGGATGTTGGAAGAAGCAGCTAAGTATAGCAAAAGATGCACGGCGCGTAGATTTACTCTGTTATAGGCTATATTTGAGCTACAAGCTCCTTGATGGGACTTCGAGGTATAAAGAATTGCATGAAATAGTACTGAAGGCTAAGGGTAAACTGGAAACAGAAGTTGGTCCGGTTAATGGGGTTTCTGTCAAGATGGTTCGTGGCACTGTCAGCAGACTCTCCATTGCTAGTGATGTGCAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGGGTGGCTTGTCAGTTTTTCCAACGTAAATCCAGATTCCAGAGAGGATTCACTTCCTGCAGCCTGCAAGTTTTTTTTTGAAGAGGTAACAGCTTCCTCAGTCAAAATCATTTTGATTGAAGTGTCAAATGCACCTTCTGAGGACATTAAGGGCTACAAGCTCTGGTATTACAAAAGTAAGGACGAGTTGCTAACAAAAGATCCTGTTTGTGAGTTTCCGAAAGATCAGAGGAGGATTCTATTATCCAACCTTCAGCCTTGCACAGAATATACTTTTCGGATTGTATCTTATACGGATATGGGTGACCTTGGTCATTCAGAGGCTAAGTGTTTCACCAAGAGTGTTGAGATAATTCAAAAAAATCCCTCTTCCATAGTTGATTTGAGTCATAAAAAAGAGAACTTTCTAACTGGAAGCACTTCCAAAATGGAGCCCAGTCCCACACAGGAAGATTCAGAATTCAAGGTTCGAGACTTAGGAAAAGTTTTGCGTCATGCTTGGGCTCAAGAACAAGGTTACATTGAAGAGTTTTACTGTGCTGATAAGAAAAATACTTGCAGAGGAACTGAAATGGTCAAGCCTAAAAATCTGAAAGAGCAGTTGCCTGCAGTTTCGCGGGACCTTGATTTAAATGTTGTTTCAGTGCCTGATTTAAATGAAGAACTAGTGCCTCCTTTTGAGTCTTCCAGGGATGAAGATAATGGCTACACTTTGCAGAAGGCCGTTGTGGCAGATGAAGACGTGGCTTCTCGTGATGGAGAGAAAAATGGTTTAGCAAGATCACATGGTAGTGATGATTCCCAAATCTGGACACATGGGCCAACCAGAGAAGTGCCAGCTGTTGACTCCTGCGTAGATGCATGTAGGAAAAGGGTAGCTAGCATAAATGAAGAGGCACATGATTGCAACAGCACTTTGGCTAACGGCTCTCCTTTAGGCATATCTGATGGTACATGCTCCCTGGATGAGAATTTTGAGTACTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATCAAACAGGAATTTAGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCGACAGAGCAGGAACGCAGGGTGGTTAATACCTTCATTCAGACTCTGCTCGATGATCCATGTAGTTTGGCAGGACAACTGGTTGACTCATTTTCTGATATTATATCCAACAAAAGGCCAAGAAATGCATTCTGTAGTAAGCTGTGGCATTAA 2703 0.4169 MFVPALIFIYQKKKSEKYFSIFTCSYLYMMNDVRITKNIHLNLHSLISRPYAVNSVVVLQQHCIPDDFGNWLKRGSSYKFPSLSNQLTTKKFLFGFMFLRSKFLGFAPWKPLIRCLHSPKESLHCILEDAALVSDLSRSLLSSFSWITCNLAVLIKICAVGLEELDSRPFPLQFSIFLLFPPETYFAFVCYWCPVSGVQSLSSSVQSTPEKNGHSDDASRSPELLQEFLKSGPKKELLRTCFDKDRKNILSKRRMSETKSTSKLSKKQDSKKVSSLSNQQPSRKQHRKGKNPTRFLPAPDHPSDLGHSNSWICKNPACKAVLSIDNTFCRRCSCCICHLFDVNKDPSLWLVCSSESAKGDCCGVSCHIECALQHEKVGVFDHGQLMQLDGDYCCVSCGKVTGILGCWKKQLSIAKDARRVDLLCYRLYLSYKLLDGTSRYKELHEIVLKAKGKLETEVGPVNGVSVKMVRGTVSRLSIASDVQKLCSLAIEKADGWLVSFSNVNPDSREDSLPAACKFFFEEVTASSVKIILIEVSNAPSEDIKGYKLWYYKSKDELLTKDPVCEFPKDQRRILLSNLQPCTEYTFRIVSYTDMGDLGHSEAKCFTKSVEIIQKNPSSIVDLSHKKENFLTGSTSKMEPSPTQEDSEFKVRDLGKVLRHAWAQEQGYIEEFYCADKKNTCRGTEMVKPKNLKEQLPAVSRDLDLNVVSVPDLNEELVPPFESSRDEDNGYTLQKAVVADEDVASRDGEKNGLARSHGSDDSQIWTHGPTREVPAVDSCVDACRKRVASINEEAHDCNSTLANGSPLGISDGTCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLLDDPCSLAGQLVDSFSDIISNKRPRNAFCSKLWH 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2212 900 SUPERFAMILY Fibronectin type III 520 601 IPR036116 GO:0005515
Glsi01g2212 900 ProSiteProfiles Fibronectin type-III domain profile. 512 611 IPR003961 GO:0005515
Glsi01g2212 900 Gene3D Immunoglobulins 513 610 IPR013783 -
Glsi01g2212 900 Pfam PHD - plant homeodomain finger protein 313 431 IPR032881 -
Glsi01g2212 900 PANTHER VIN3-LIKE PROTEIN 2-RELATED 201 900 IPR044514 GO:0010048|GO:0040029
Glsi01g2212 900 MobiDBLite consensus disorder prediction 252 303 - -
Glsi01g2212 900 MobiDBLite consensus disorder prediction 742 767 - -
Glsi01g2212 900 Pfam Fibronectin type III domain 520 598 IPR003961 GO:0005515
Glsi01g2212 900 CDD FN3 520 596 IPR003961 GO:0005515
Glsi01g2212 900 MobiDBLite consensus disorder prediction 252 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2212 Glsi-ChrGlsi01 85137833 85153269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2212 309 893 PHD Gene Family AT3G24440 48.316 8.71e-172 510
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g2212 01 85137833 85153269 Glsi01g2212 01 85137833 85153269 ECH