Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2174 ATGGCTTTTGAGAAGCTCCATTCCCTCTCATTGTCTCTCTTACTTGCATTCCTTCCGCTTTCCACTTTTGCTCAATCTTACAGTAATGTTTCCTTGGGTACTTCCCTCACTGCAGGGGAAGATAGCTCCTTCTGGGCATCGCCATCTCGTGATTTTGCATTTGGTTTCCGACAGATTGAGGAAGATGGGTTCTTACTAGCCATCTGGTTCAACAAAATATCAGAAAGAACTGTTGTCTGGTCAGTCAATGGAGAAAATCTTGCACCAAAGGATTCCAAAGTTGAGCTCACCTCAGATGGTGTCTTCCGGCTCAATGATCCCAGCGGTAAGCAGATATGGAATGCTAGCTCTTCAGGCAATGGAGTTGCTTATGCAGCCATGCTTGATACGGGTAACTTTGTGCTGGCTAGCCAAAATTCTCAACATTTGTGGCAGAGTTTTGATCAACCAACGGACACAATTTTACCAGGACAGGTTCTAAATCAACCTGATCGACTGGTTTCACGCTATTTGGAAACTAATTATTCAAGGGGAAGATTCCAGTTTGTACTACAGGGTGATGGGAATCTCGTGCTCTACACAACTCATTTCCCATTGGATTCCGTAAATTTTGCTTATTGGTCTACCCAGGTTTTTGGCAGTGACTTTGCATTGGTCTTCAACCAATCGGGCTATATCTTTGTTCAGAGTAGTAACGGAAGTATAATTAATGCAATATCATCGAATGCTTCCTCCACACAAGATTTCTACCAGAGAGCTACTCTTGATTATGATGGAGTTTTCAGGCTTTATATCTACCCCAAGATCAGCAGTAGTTCCAGTCCCACGGCCTGGTCAACTTCGTCTTTCCAACCTCCAAATATTTGTTCTATTACGGAAGATATAGGAAGTGGAGCTTGTGGATTCAACAGCTACTGTAAGCATGATGATGGGGCCAAAAGCTGCCACTGTCCATCTGGTTACAGCTTCATTGATCCAAATGATGAGATGAAAGGATGCAAACAGAACTTTATTTCACAAAGTTGTGATGAAACTTCTACAGAGACACATCTCTTTGATTTTTATGAGATGCCAAATACGAATTGGCCACTAACTGACTACGGACATTTTGAAGTAGTAAGTGAGGATTGGTGCAGAGAGGCTTGCCTGAGCGACTGTTTTTGTGCCGTTGCTATTTTCGGAGCAGGGCAATGCTGGAAGAAGAAGCTACCTCTCTCTAATGGAAGAAATGATTCTTCTGAGGAAGGGAAAGCTCTAATCAAAATAAGAAAAGATAATTCTACTCTCAATTATGGGGATCCTGATAAAAAGAATGATGGGACCAAACTGGTTATTATTGGATCAGCACTTTTAGGCAGTTCAGTGTTATTGATCTTCCTCTTCTTAGTGGCAGCTTTTCTGGTTGCATACCGGTTTAGCCACAAGAATCCTATGGTGCATCGAACTGTCCAGTTCTCGTCAAGCAAGAATATTAGAAGTTTCACTTACGAAGAGTTAAGGAGAGCAACAAATGGGTTCACAGAAGAACTGGGTCGTGGTGCATTTGCAACAGTTTACAAAGGAGTTTTATTGGACCTTCCAGGGAACCTCGTTGCTGTGAAAAAATTGAAAATGGTAAAAGAAAGCGAGGATGAATTTAAAGCAGAAGTGACTGCAATTGGCCGAACACACCATAGGAATTTGGTCCAACTTTTGGGATTCTGTAATGAAGGGGAGAACAGACTACTTGTGTACGAATTCATGAGCAATGGAAGTTTAGCAAATTTTCTTTTTGAAGACCAGAGGCCAAGCTGGTATCAAAGAGTGCAAATTGCAATAGGAACAGCCAGAGGACTCTTGTACTTGCATGAAGAGTGCAGCACTCAGATCATCCACTGTGATATCAAGCCTCAGAACGTCTTGCTTGATGACTGTTACACAGCAAAAATCTCAGACTTCGGTTTAGCGAAGCTATTGAAGATTGACCAGAATGGAACTAAAACGAGGATCAGGGGAACTAAAGGGTATGTTGCAGCGGAGTGGTTTAAGAATGTTCCCATTACCATGAAGGTGGATGTTTACAGCTATGGAGTTTTGTTATTGGAGCTCATCTGCTGCAGGAAGAGCTTTGATATGGAGATTGAGGATGAAAAAGAGATGGTACTGATGGATTGGGCATGTGATTGCTTCCAGGATAGGAAACTTGAGGTGCTGGTGAAAGATGATAAGGAGGCGTTAGACGACATGAAGAGGGTAGAAAAGTATGTGATGATCGCCATCTGGTGCACCCAGGAGGATCCATCACTGAGACCCACCATGAAGCAGGTCTTACTGATGCTTGAAGGGTTTATAGATGTAGCGAATCCCCCTGATCCACTCTCCTTTGCAAGTTAG 2373 0.4277 MAFEKLHSLSLSLLLAFLPLSTFAQSYSNVSLGTSLTAGEDSSFWASPSRDFAFGFRQIEEDGFLLAIWFNKISERTVVWSVNGENLAPKDSKVELTSDGVFRLNDPSGKQIWNASSSGNGVAYAAMLDTGNFVLASQNSQHLWQSFDQPTDTILPGQVLNQPDRLVSRYLETNYSRGRFQFVLQGDGNLVLYTTHFPLDSVNFAYWSTQVFGSDFALVFNQSGYIFVQSSNGSIINAISSNASSTQDFYQRATLDYDGVFRLYIYPKISSSSSPTAWSTSSFQPPNICSITEDIGSGACGFNSYCKHDDGAKSCHCPSGYSFIDPNDEMKGCKQNFISQSCDETSTETHLFDFYEMPNTNWPLTDYGHFEVVSEDWCREACLSDCFCAVAIFGAGQCWKKKLPLSNGRNDSSEEGKALIKIRKDNSTLNYGDPDKKNDGTKLVIIGSALLGSSVLLIFLFLVAAFLVAYRFSHKNPMVHRTVQFSSSKNIRSFTYEELRRATNGFTEELGRGAFATVYKGVLLDLPGNLVAVKKLKMVKESEDEFKAEVTAIGRTHHRNLVQLLGFCNEGENRLLVYEFMSNGSLANFLFEDQRPSWYQRVQIAIGTARGLLYLHEECSTQIIHCDIKPQNVLLDDCYTAKISDFGLAKLLKIDQNGTKTRIRGTKGYVAAEWFKNVPITMKVDVYSYGVLLLELICCRKSFDMEIEDEKEMVLMDWACDCFQDRKLEVLVKDDKEALDDMKRVEKYVMIAIWCTQEDPSLRPTMKQVLLMLEGFIDVANPPDPLSFAS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2174 790 Pfam Protein kinase domain 508 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2174 790 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 784 - -
Glsi01g2174 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 148 - -
Glsi01g2174 790 PIRSF SRK 1 790 IPR024171 GO:0004674
Glsi01g2174 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 781 - -
Glsi01g2174 790 Gene3D Transferase(Phosphotransferase) domain 1 581 779 - -
Glsi01g2174 790 CDD STKc_IRAK 510 776 - -
Glsi01g2174 790 ProSitePatterns Protein kinases ATP-binding region signature. 510 535 IPR017441 GO:0005524
Glsi01g2174 790 CDD B_lectin 35 150 IPR001480 -
Glsi01g2174 790 FunFam S-receptor-like serine/threonine-protein kinase 473 580 - -
Glsi01g2174 790 Gene3D - 150 273 IPR036426 -
Glsi01g2174 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Glsi01g2174 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 279 IPR036426 -
Glsi01g2174 790 Gene3D Phosphorylase Kinase; domain 1 468 580 - -
Glsi01g2174 790 FunFam Serine/threonine-protein kinase 151 292 - -
Glsi01g2174 790 Pfam D-mannose binding lectin 77 161 IPR001480 -
Glsi01g2174 790 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Glsi01g2174 790 SMART blect_4 35 150 IPR001480 -
Glsi01g2174 790 FunFam Uncharacterized protein 150 274 - -
Glsi01g2174 790 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2174 790 CDD PAN_AP_plant 340 422 - -
Glsi01g2174 790 Gene3D - 24 149 IPR036426 -
Glsi01g2174 790 SMART serkin_6 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2174 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 209 IPR036426 -
Glsi01g2174 790 SUPERFAMILY Protein kinase-like (PK-like) 481 774 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2174 Glsi-ChrGlsi01 84831337 84833709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2174 490 775 Receptor kinase-like Gene Family AT1G60800 43.537 1.63e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi01g2174 Pkinase 5.6e-48 CL0016