Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2159 ATGATGAGTATTATGGTGCCCGTGTGCAAACAAGTTCAAGCCCCATTGAATTTCCAAAAGGGACTCAGCTTGGATCCCTTCTTCCATCATCGTAAGGAGAAGGTGGTGGTTATAATGGGCGCCACCGGCTCCGGCAAGTCAAAGCTTGCCATAGACTTGGCCACCCATTTCACTCCAGCTGAGATTGTGAACTCTGACAAAATGCAAGTCTACAAAGGCCTTGACATCACCACCAACAAGGTGACAGAAGAAGAGTCTCTTGGTGTGCCGCACCATTTGATAGGCGTCGCTGATCCCAACTCCAATTTCACTTCCAATGACTTCTGCTACCATGCCTCTATGGCCATTGATTCCATTGGCAATAGGCATTGCTTGCCCATTATTGCCGGTGGTTCCAATTCCTACATCGAAGCCTTAGTGAACCATGATGCTGAATTTCGATTAAGGTACGAGTGCTGCTTCCTCTGGGTCGATGTGGCACTTCCTGTGCTCCATTCGTTCTTGTTGGAGCGAGTTGATCGCATGGTTGAGGCTGGCCAAGTTGACGAGGTTCGTCAAATATTTGACCCTTTGGCTGACTACACAAGAGGGATTAGAAGGGCTATTGGAGTTCCTGAATTGGATCGATTCCTGCGAACGGAGGATGTAGCCGATGAGAGGACCAAGAAGAGGTTTCTGGAGGCTGCCATTTCTAGGATCAAAATCAACAACTGCCAGCTTGCGAATCGTCAGCTTCAGAAGATTCATCGGCTTCATAGCTTGTGGAAGCGGAATTCGCATCGCCTTGATGCAACTGAGGCCTTCATAAAGAGTGGTGAGGAAGCAGACGAGGCGTGGGAGAATCAAGTGGTGACCAAGAGCCGAAGGATCGTGCACAAGTTCCTGTACGAGGAAAACCATGTTCCCGCCACAACTATTGTGTCTCCGAAAACTAATGTTGCTGTGCCGCCGCCTCAGGTAGCAATGGCCGCCGCAACCCATTAG 984 0.4959 MMSIMVPVCKQVQAPLNFQKGLSLDPFFHHRKEKVVVIMGATGSGKSKLAIDLATHFTPAEIVNSDKMQVYKGLDITTNKVTEEESLGVPHHLIGVADPNSNFTSNDFCYHASMAIDSIGNRHCLPIIAGGSNSYIEALVNHDAEFRLRYECCFLWVDVALPVLHSFLLERVDRMVEAGQVDEVRQIFDPLADYTRGIRRAIGVPELDRFLRTEDVADERTKKRFLEAAISRIKINNCQLANRQLQKIHRLHSLWKRNSHRLDATEAFIKSGEEADEAWENQVVTKSRRIVHKFLYEENHVPATTIVSPKTNVAVPPPQVAMAAATH 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2159 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 193 IPR027417 -
Glsi01g2159 327 Gene3D - 32 295 IPR027417 -
Glsi01g2159 327 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 161 259 - -
Glsi01g2159 327 Pfam IPP transferase 148 246 - -
Glsi01g2159 327 Pfam IPP transferase 69 142 - -
Glsi01g2159 327 FunFam Adenylate isopentenyltransferase 5, chloroplastic 161 259 - -
Glsi01g2159 327 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 32 295 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2159 Glsi-ChrGlsi01 84665963 84666946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2159 149 298 C2H2 Transcription Factor Family AT2G27760 35.028 1.53e-21 93.2