Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2149 ATGAAAGCTTCTGCCATGAAGCAGCAGGCAAGGATAATGAATGAGGACGTGAATTTCAGGTCCCGCAGAAGATACATTGGAGAGTTTGAGTACGTTGATGATCACAGGGCTGGCAAAATCGTGTTTGGGTATATTGTCTTGACTACCTCTGCGGGCGAGTCTGGGATGGCAGAGTTGCTGAAAAGGACAAGCTTGTGCTCCCGTCTAGACCCCCAAGTTTCTGCAGCTGCCAGCCATAGTCGCGCCGTTTCTCTGAGGCTCCACGTTGATGCTGATTTGGTTCAAGGGCTACTGTCACTTATGCCTAATGGCACAATGGTGAAAGTCAGTGTCCTGAATGATGCTCTCAAGAGCATGTACAATGCTGAGAAACGGGGGAAACGTCAGGTCATGATTCGGCCTTCCTCAAAAGTGATCATTAAATTCCTTTTGGTGATGCAGAAGCATGGATATATTGGAGAGTTTGAGTACGTTGATGATCACAGGGCTGGCAAAATCGTGGTTGAATTGAATGGAAGACTGAACAAATGTGGGGTTATCAGTCCCCGGTTTGATGTGGGTGTCAAAGAGATAGAAGGTTGGACTGCAAGGCTGCTTCCCTCACGACAGTTTGGCTATATCGTATTGACTACCTCCGCCGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGTGACATTTTATATTCGGTCCTTTTCAAGTTTCCAGCTGAGCTCTACACCACAGCCTTTCAACTTGAAGTGTACGGCCTCTCTGGAGTTTGGTGATCTGGATTTGAGTTGA 792 0.4697 MKASAMKQQARIMNEDVNFRSRRRYIGEFEYVDDHRAGKIVFGYIVLTTSAGESGMAELLKRTSLCSRLDPQVSAAASHSRAVSLRLHVDADLVQGLLSLMPNGTMVKVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGVTFYIRSFSSFQLSSTPQPFNLKCTASLEFGDLDLS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2149 263 Gene3D - 175 231 - -
Glsi01g2149 263 FunFam 40S ribosomal protein S15a 106 174 - -
Glsi01g2149 263 Pfam Ribosomal protein S8 112 227 IPR000630 GO:0003735|GO:0005840|GO:0006412
Glsi01g2149 263 ProSitePatterns Ribosomal protein S8 signature. 205 222 IPR000630 GO:0003735|GO:0005840|GO:0006412
Glsi01g2149 263 Gene3D - 106 174 - -
Glsi01g2149 263 PANTHER 40S RIBOSOMAL PROTEIN S15A 106 228 IPR000630 GO:0003735|GO:0005840|GO:0006412
Glsi01g2149 263 FunFam 40S ribosomal protein S15a 175 231 - -
Glsi01g2149 263 SUPERFAMILY Ribosomal protein S8 109 227 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2149 Glsi-ChrGlsi01 84537657 84546893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2149 106 227 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.721 9.16e-86 250