Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2148 ATGATGCCTGATCAAAGAAAAAAGTCCTCTGTGGATGTAGACTTCTTCACAGAATATGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCCTATGATACACACACGGGAGAAAAAGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCTACCCGCATTCTTCGTGAGATTAAACTTCTTAGACTCTTGCGTCATCCAGATATTGTGGAGATCAAGCACATCTTGTTACCTCCTTCTAGGAGAGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAAGTCATCAAAGCAAACGATGATCTGACTCCAGAGCATTACCAGTTTTTTCTATATCAGCTTCTTCGAGGCTTGAAGTACATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGATTGCAAACTCAAGATCTGTGACTTTGGTCTTGCCAGAGTAGCTTTTAATGATACACCCACTGCCATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGCTGTGCGGATCATTTTTCTCTAAGTATACACCAGCTATAGATATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAGTTGGACCTCATGACTGATCTCCTTGGAACACCATCTCCTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGGTATTTAAGCAGCATGCGCAAGAAGAAGCCAGTTCCTTTAACCCATAAGTTTCCTCATGCAGATCCCCTTGCTCTTCGTTTGTTAGAAAGAATGCTTGCGTTTGAGCCCAAGGATCGACCTACTGCTGAAGAGGCTTTAGCAGATCCATATTTTAAAGGTTTGGCCAAGGTTGAGAGAGAGCCTTCAGCACAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGGCGTAGGATAACAAAGGAGGATGTACGAGAGCTCATATACCGAGAGATTCTTGAATACCATCCAAAGATGTTGAAGGAGCAACTAGAAGGAGCAGAGCCAACAAGTTTTATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCTTATCTTGAGGAGCATTATGGTAAAGGTGGAACTGTTGCTCCACCAGAGAGGCAGCATGCATCATTACCCAGGCCATGCGTATTATATTCAGATAACTCAATACCGAGTACAGCTGAGGTCACTGAGGATCTCTCTAAGTGTTGCATCAAAGAAGTTGAGAAGCCACCAATAGATAGGAGTGGTGGTATCCCTATAACTCGGCTTCCTTTACAAGTTCCTCAAAACATGCAAGGTGTTTCTGCAAGGCCTGGAAAAGTTGTTGGTTCAGTATTGCGTTACAACAACTGTGGGGTAGCAGCAACAGCGGAAGCTTTTGAACAGCGGAGGATGGTTAGAAATCCACCTGTTTCAGCCCAATATGCAGCTTCAAGCTGTTCATATCCTAGAAGAAACCCAAGCTGTAAAAGTGAGAGGGCTGAAGATGATGGGATTGAAGGTTCTAATGGCCTGCAGCCAAAGCCTCAATACATGCCTAGAAAAGTTGCTGCTGCTCAAGGTGGACCCGGTAGTCATTGGTACTGA 1692 0.4267 MMPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPVPLTHKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEQLEGAEPTSFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNSIPSTAEVTEDLSKCCIKEVEKPPIDRSGGIPITRLPLQVPQNMQGVSARPGKVVGSVLRYNNCGVAATAEAFEQRRMVRNPPVSAQYAASSCSYPRRNPSCKSERAEDDGIEGSNGLQPKPQYMPRKVAAAQGGPGSHWY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2148 563 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Glsi01g2148 563 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Glsi01g2148 563 MobiDBLite consensus disorder prediction 517 563 - -
Glsi01g2148 563 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Glsi01g2148 563 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Glsi01g2148 563 FunFam Mitogen-activated protein kinase 15 119 - -
Glsi01g2148 563 FunFam Mitogen-activated protein kinase 111 339 - -
Glsi01g2148 563 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi01g2148 563 CDD STKc_TDY_MAPK 24 361 - -
Glsi01g2148 563 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2148 563 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2148 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
Glsi01g2148 563 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2148 Glsi-ChrGlsi01 84531624 84537590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2148 1 563 MAP Kinase Gene Family AT5G19010 81.533 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi01g2148 Pkinase 4.6e-68 CL0016