Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2124 ATGGGTTGTGTCCATTGCAAGTGTTGTCGCGGCTACCCTCCGCGATCAGATTCTGGGGGTCCCCGGGACTACCGAGAACTCGGTCCCTACCGTGCCCAATGGAAGCATAAACGTAATCAGAGATCATTGGAGTCTGTTTCCGTTCCTTCTCACAACTTCATGTTGGAATACTCTGTTCTCACACAGCGGGGATACTACCCCGACTCACTGGATAAAGAAAACCAAGATAGTTTCTGTATTAAGACACAAGTTCAAGGTAACCCAAATATCCATTTTTTTGGTGTCTATGATGGGCATGGTCAATTGGGTAGCCAGTGCTCGAACTTTGTTAAAAACAGGTTGATAGAAACATTATCAAATGACCCCGCCTTGTTGGAGGAACCTGTTCAGGCTTATACTTCAGCATTCTTCACAACAAATTACCAATTACATCAGAGTGAGATCGACGATTCTATGAGCGGCACTACCGCAATCACAGTGCTTGTTATCGGAGACACCCTTTATGTTGCTAATGTTGGTGATTCGAGAGCAGTGCTAGCGGTTAAGGACGGGAATTGCATTGTTGCTGAGGACTTATCTTTTGATCAGACACCATTTCGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGCGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCTTAAGGATCCAGATATCCAGACTTGGGGCGATGAAGAGAGTCAGGGTAGCGATCCTCCAAGGTTGTGGGTTCCAAATGGGATGTATCCTGGAACTGCATTTACGAGGAGTTTAGGGGATAGTTTGGCAGAGACTATAGGTGTCACTGCTACTCCAGAGGTGTCAATGGTTCAGCTTACACCTAATCATCTTTTCTTTATTGTGGCAAGTGATGGCGTATTCGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCAGCTAGCTATACAGATCCCTGGGATGCATGTGCTGCCATTGCTGGAGAGTCATATAAACTATGGTTGGAACATGAGAACCGAACAGATGACATAACAATTATCATTGTTCAGATCAAAGGCCTATCTAATGCAGGTACTTCTGGAGTTGGATCAGATAATATCAACGTTGCTACTGTAACGAGGGCCAAGAGAGGAACTTCTGAAATATCTGCTACCACTGGGTCAGATATTTATTCTTCTGTGAGGAGTGATTTCTCTGAGCAAGTAGTCTCAGTCAGAAGCCCAGCTATAGTGGTTCCCTCTCCAGCATGTCAAAGATCAATTGGATCGTGA 1257 0.4503 MGCVHCKCCRGYPPRSDSGGPRDYRELGPYRAQWKHKRNQRSLESVSVPSHNFMLEYSVLTQRGYYPDSLDKENQDSFCIKTQVQGNPNIHFFGVYDGHGQLGSQCSNFVKNRLIETLSNDPALLEEPVQAYTSAFFTTNYQLHQSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNCIVAEDLSFDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDIQTWGDEESQGSDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVTATPEVSMVQLTPNHLFFIVASDGVFEFLSSQTVVDMAASYTDPWDACAAIAGESYKLWLEHENRTDDITIIIVQIKGLSNAGTSGVGSDNINVATVTRAKRGTSEISATTGSDIYSSVRSDFSEQVVSVRSPAIVVPSPACQRSIGS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2124 418 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Glsi01g2124 418 PANTHER PROTEIN PHOSPHATASE 72 345 IPR015655 GO:0004722|GO:0006470
Glsi01g2124 418 SUPERFAMILY PP2C-like 44 348 IPR036457 -
Glsi01g2124 418 Gene3D - 40 348 IPR036457 -
Glsi01g2124 418 ProSiteProfiles PPM-type phosphatase domain profile. 56 346 IPR001932 -
Glsi01g2124 418 SMART PP2C_4 52 344 IPR001932 -
Glsi01g2124 418 Pfam Protein phosphatase 2C 75 316 IPR001932 -
Glsi01g2124 418 CDD PP2Cc 72 346 IPR001932 -
Glsi01g2124 418 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 51 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2124 Glsi-ChrGlsi01 84313759 84317482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2124 1 351 PP2C-type Phosphatase Gene Family AT3G06270 72.443 0.0 525