Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2105 ATGGACTGCAATAGAGAAGAGGCCGTAAGGGCCAAGGACATTGCTGAAAAGAAGATGAAAAGCAAGGATTTCACAGGGGCTCGTAAACTTGTTCTTAAGGCTCAGCAATTATTTCCTGATCTGGAGAATATAACTCAGATGCTTATTGTTTGTGAGGTGCATTGCTCTGCTGAGCAGAAATTGCCTGGTAATGAAATGGATTGGTATGGAATTCTTCAAATTGAGCAGACAGCCAATGAGGCAACAATAAGGAAGCAATACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACAAGTCTGCTGGTGCAGAAGCTGCATTTAAGCTGATCGGGGAAGCTCAAACAGTGCTTTTGGACAGTGGGAAACGGACTATGCATGACATGAAGCGCAAAACTTCAATGTCATATCGTCCACCACATAACTATCATGTGAATTTAAATGCTGGGGTGAAAAACAATGTCAGGACCAATTTTACTAACTTGAATCCCCAGCAGGGGCTCAATGGTGGCTCCCCTACTTTTTGGACTGCCTGCCCATTTTGTTCTGTTAGATATCAGTATTACAGAGAAGTTCTAAATAGATCTCTTCGCTGTCAAAGCTGCAACAGGCCCTTCATTGCATATGACATGAATGTTCAAGGTACATCTCCAACAACTTATTCAAGTCAGCATGCTTTTGGCCAGCCAAAAGATGGTCTGAACTATGGTCCTTTTAAGGTGGGTATTGGATCTCAAGGTAATTCGCATGCTGGAAATGTCAATAAAAAACTTTTTGAAAAAAAGGGCCCTACATCTTGTGTCTCTAGAAAGGTAAATGGAAAGAGTCAGAGAAAGCGAGCAGTGGAAACTAGTGAAAGTTCTGATTCTATAGGCACCAGCAGCACCGATTCTGAAAGTGATAAGATCGCTGATGAGGATGGTGTTACTGGTGGACAAAACCATTCGACTTATAGAGAAGAGAATCCTCGTAGATCTACACGGCAAAAGCAGCAGGTTTCCTACAACGAGAATTTGAGTGATGATGATGACGGCTTTGTATGGCCTTCAAAAAGGGCTAAGGGGAGTAAATCACCATGTGTTGCTGAAGAAGATAATGAAAAGGCAGCTAATAATAATGTTCAGAATGGTTTAGCTGCCGAATTGAAAGATAATAAGAAAGAGGTGAAACAGAGACACAGTCTTTATTCTAAAAAGAGCTTACTAAGTAGAACTGAGGAAACTAAGGAGGTGTGGGGAAAACAAGTGGAAAGCTCAAAGATGAGGGCTGAAGTTAGTGAGCATTGTACACCAGATACACCCTCCAATGCAACGCACCATCCAAATGTTTATGTCTTTCCTGATGCAGAGTTCAGTGACTTTGATAAAGACAAGAAAGAAGATCGTTTCGTAGCTCGGCAGATTTGGGCTGTTTATGATACAAAAGATGGCATGCCTAGATTCTATGCTCTAATCAGAAAAGTTTTTTCCTCTGGCTTTAAGCTGCGGATAACATGGTTTGACCCAGCACCGACTGACAAGGATGAAATTAAATGGGTAAACAAGCAATTGCCAGTTGCTTGTGGGAAATTTAGGCTTGGTGAATCTGAAATCACAGAAGATTATCCCATGTTTTCTCATAGGATTCTGAGTAAAAAGATTGACCATGATACTTTTAATGTTTATCCTAGAAAGGGAGAAACTTGGGCTCTCTATAAAAATTGGGATATTCGATGGTACACTGATGTGGGAGCTCATCAGAAGTATGAATATGAGTTTGTTGAAATCTTATCAGACTATGTTGAAGGTGAGGGTGTGTTTATTGCATACTTGGCTAAATTGAAGGGCTTTGTGAGTCTCTTCTCTCGAGTTATGAAGGAGGGCACTCATTCAATTCAAATTCCATCAGTGGAGTTATTCAGATTTTCTCACAGGGTTCCATCTTGTGAAATGACTGGTCAGGAAAGAGTAGGTGTTCCTATAGGATCTTATGAACTCGATCCTGCATCTTTGCCTTTGAATCTTGAAGAGACTGCTGTTTCTGATGATTTGGAAGTGAAGGTTGGTCATAGTCCCCCTGGTGTGAATAAAAGATCTTCGGATAGATTGAATCCCATGACGAAGTCTGATGGAGATGTATCTACTTTCCAGGATAATTTGGAAAGAAGCAACTCAATGAAAAACAGTGGGTCCTTTGCTTATGTTGAAGGTTGTAGTGCTCCTTCAGCTTCAACGCCAGAAGCTATGGAAATTCCAGATCCTCAGTTCTACAATTTTGATGCTGGGAGGTCCTTGGAAAAGTTTCATACTGGTCAGATTTGGGCATTTTATAGCGATGAGGATGGCTTGCCAAAGTACTATGGTCGGGTTATGAAAATTGGGACTAGCCCAAATCTTGAATTGCATATTATGTGGCTTGCTTCCTGCTGGCTCCCAGAGAACGCTATTAGATGGGAAGACAAGGACATGCTTATTTCTTGTGGCAGATTTAAAACTAAAAGTGGTAATTCAAATGTCTATACTAACACCCTTTCCATTTCACATCAAATGCACGTTAAAATTGATGGTAAGAACAATGAATATGCCATCTTTCCTAGGAAAGGTGAGGTTTGGGCATTATATGGGAATTGGACGGCTAACATCAAATGTTCTGATTTGGTAAACTGGGATTATGACATAGTGGAAGTTCTTGAAGAAAATGAATTACTTGTAATTCTCAACAAAGGAAATCATCAAGTTTTGTTGCCAAAGCATCGAGCACGCAAGGCACGGCAATGTCCACCAGGGAAATCCTCTGTTCTGCAGGCCGAAGCAGAGTCGGACATGGATGAGGCCACACATTCCCTTGGCTCTGAACTTCGCTCGTCCTAG 2850 0.4126 MDCNREEAVRAKDIAEKKMKSKDFTGARKLVLKAQQLFPDLENITQMLIVCEVHCSAEQKLPGNEMDWYGILQIEQTANEATIRKQYRKFALQLHPDKNKSAGAEAAFKLIGEAQTVLLDSGKRTMHDMKRKTSMSYRPPHNYHVNLNAGVKNNVRTNFTNLNPQQGLNGGSPTFWTACPFCSVRYQYYREVLNRSLRCQSCNRPFIAYDMNVQGTSPTTYSSQHAFGQPKDGLNYGPFKVGIGSQGNSHAGNVNKKLFEKKGPTSCVSRKVNGKSQRKRAVETSESSDSIGTSSTDSESDKIADEDGVTGGQNHSTYREENPRRSTRQKQQVSYNENLSDDDDGFVWPSKRAKGSKSPCVAEEDNEKAANNNVQNGLAAELKDNKKEVKQRHSLYSKKSLLSRTEETKEVWGKQVESSKMRAEVSEHCTPDTPSNATHHPNVYVFPDAEFSDFDKDKKEDRFVARQIWAVYDTKDGMPRFYALIRKVFSSGFKLRITWFDPAPTDKDEIKWVNKQLPVACGKFRLGESEITEDYPMFSHRILSKKIDHDTFNVYPRKGETWALYKNWDIRWYTDVGAHQKYEYEFVEILSDYVEGEGVFIAYLAKLKGFVSLFSRVMKEGTHSIQIPSVELFRFSHRVPSCEMTGQERVGVPIGSYELDPASLPLNLEETAVSDDLEVKVGHSPPGVNKRSSDRLNPMTKSDGDVSTFQDNLERSNSMKNSGSFAYVEGCSAPSASTPEAMEIPDPQFYNFDAGRSLEKFHTGQIWAFYSDEDGLPKYYGRVMKIGTSPNLELHIMWLASCWLPENAIRWEDKDMLISCGRFKTKSGNSNVYTNTLSISHQMHVKIDGKNNEYAIFPRKGEVWALYGNWTANIKCSDLVNWDYDIVEVLEENELLVILNKGNHQVLLPKHRARKARQCPPGKSSVLQAEAESDMDEATHSLGSELRSS 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2105 949 MobiDBLite consensus disorder prediction 912 949 - -
Glsi01g2105 949 Coils Coil 379 399 - -
Glsi01g2105 949 SUPERFAMILY Chaperone J-domain 64 147 IPR036869 -
Glsi01g2105 949 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 684 - -
Glsi01g2105 949 Gene3D DnaJ domain 64 169 IPR036869 -
Glsi01g2105 949 Pfam DnaJ domain 67 128 IPR001623 -
Glsi01g2105 949 MobiDBLite consensus disorder prediction 690 706 - -
Glsi01g2105 949 SMART dnaj_3 66 123 IPR001623 -
Glsi01g2105 949 PRINTS DnaJ domain signature 103 123 IPR001623 -
Glsi01g2105 949 PRINTS DnaJ domain signature 69 87 IPR001623 -
Glsi01g2105 949 PRINTS DnaJ domain signature 87 102 IPR001623 -
Glsi01g2105 949 CDD DnaJ 67 120 IPR001623 -
Glsi01g2105 949 MobiDBLite consensus disorder prediction 675 706 - -
Glsi01g2105 949 MobiDBLite consensus disorder prediction 265 373 - -
Glsi01g2105 949 Pfam Domain of unknown function (DUF3444) 443 648 IPR024593 -
Glsi01g2105 949 Pfam Domain of unknown function (DUF3444) 740 894 IPR024593 -
Glsi01g2105 949 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2105 Glsi-ChrGlsi01 84177159 84181716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2105 4 208 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.714 1.50e-28 116