Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2077 ATGTTCGATCGTTATCGAAAAGCAATGCTCTTTCTGAAGGGTTCTATGCGAAGCCCACGAATCCCATGGCTATGTGTTCTTCTGCAACATAGCCCCTCACCAGTAGCGCTCAGGTACAGCACAGCCAGAACGAGCTCTACGAAGAAGCAGAACTTGAGGCTCAACTACCTCGTTAACAATTGTGGGTTTTCCCCAGAAACCGCAGTAGAGGTTTCCAAGTATGTCTCTTTCCTTAACTCAGAGAAGCCAGACGCTGTCCTTACACTCATTAGAAACCTTAATATTTCAGATTCTCAGTTACGTGATATCATTAAAAAGGAACCTGGGCTGCTTTCAAGCAATCCCGTGAAGAACATTTCGCCTAAGCTAGAGTTTTTGAAGTCTAAAGGTGCTTCGAGCTCCCAGCTTGCCCACATCGTGACCACTTACCCCAGGTTCTTGTTGATCAGCTTAGGGAATCAAATAATCCCTCTTTATGATTTGATAAATAGCTTCCTTCATTCTGATGAAAGGACCATTACGTCTATAAAACGCTGTCCCGGTCTCATGGCTGATTGTCGCTTTGCACATAAAGTGAAACTATTGCTTGATTACGGGGTGCCAGAGCCAGGCATTGCTTTGCTACTTCGTCATTGGCCTGGAATAATGAACTTCCAAAAAGATAAGTTGAAAACGAAGGTAGATGAAATAAAGACATTAGGATTTCATCCTTCAAAAATATCTTTCATAGAAGCACTGCGCACCAAAGTAATATTAAGCCAATCCTCATGGGAAAGAAAGGTTGAATTGTTTGGGAAGTGGGGTTGGTCTGATGAAACACTTCATAGAGCATTTACCAAGCGCCCTTTCTGTATGCTGATATCTGACAGTAAAATTGAGGCGGTCATGGAATTTTTTGTCAACCACATGGGTTGGGATTCTCTAATGCTTGCTGAATACCCAGTACTATTTAGTTTTAGTTTGGAGAAACGAATCATTCCTAGGGCGTCTGTATTGCAGTTTCTTCAATCAAGAGGTTTGATTAGGGAATATGCTAGGGCTAGTCCCTTTTTTATTACTAAAGAGATGTTCCACCAGAAATTTGTGAATTGCTTTAAGGATGAAGCTCCTCAGTTATTGAAACTGTATAAAGAGAAAATGAATACTTCTAGATAA 1155 0.413 MFDRYRKAMLFLKGSMRSPRIPWLCVLLQHSPSPVALRYSTARTSSTKKQNLRLNYLVNNCGFSPETAVEVSKYVSFLNSEKPDAVLTLIRNLNISDSQLRDIIKKEPGLLSSNPVKNISPKLEFLKSKGASSSQLAHIVTTYPRFLLISLGNQIIPLYDLINSFLHSDERTITSIKRCPGLMADCRFAHKVKLLLDYGVPEPGIALLLRHWPGIMNFQKDKLKTKVDEIKTLGFHPSKISFIEALRTKVILSQSSWERKVELFGKWGWSDETLHRAFTKRPFCMLISDSKIEAVMEFFVNHMGWDSLMLAEYPVLFSFSLEKRIIPRASVLQFLQSRGLIREYARASPFFITKEMFHQKFVNCFKDEAPQLLKLYKEKMNTSR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2077 384 Gene3D Transcription termination factor 3, mitochondrial 186 375 IPR038538 -
Glsi01g2077 384 Gene3D Transcription termination factor 3, mitochondrial 68 185 IPR038538 -
Glsi01g2077 384 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Glsi01g2077 384 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Glsi01g2077 384 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Glsi01g2077 384 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Glsi01g2077 384 SMART mt_12 206 236 IPR003690 GO:0003690|GO:0006355
Glsi01g2077 384 PANTHER CGI-12 PROTEIN-RELATED 53 367 IPR003690 GO:0003690|GO:0006355
Glsi01g2077 384 FunFam Mitochondrial transcription termination factor-like 151 369 - -
Glsi01g2077 384 Pfam mTERF 183 354 IPR003690 GO:0003690|GO:0006355
Glsi01g2077 384 Pfam mTERF 87 187 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2077 Glsi-ChrGlsi01 83950471 83951625 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi01g2077 mTERF 7.4e-22 No_clan