Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2076 ATGTCAAGACCCACAAGAAGGAAAGCTCCAAACTATTCTCAGTTACGTGATACCATTAAAAAGGTACCTGGGCTACTTTCAGGCAATCCCGTGAAGAAAATTTCGCCTAAGCTAGAGTTTTTGAAGTCTACAGGTGATTCGAGCTCCCAACTTGCCCAAATCTTGACCAATAACCCTTGGTTTTTGCTGAAAAGCTTAGAGAATCATATAATCCCTTCTCATTATTTGATAAAAAGATTCATTTTTTCTGATGAAAAGACCATTCCGTCTATAAAACGGTGGCCCTTTCTCATCAATGACTATCGCCTGGCGCAAAAATTTCAGCTATTGCTTGATAATGGGGTGCTTGAGTCACGCATTGCTTTGCTACTTCGTCATTGGCCTGTACTAATCAACCTCAAAATAGATGAGTTGAAAACGAAGGTGTATGAAGTAAAGGAATTGCGATTTCATCCTTCAAAATCAACTTTCTTTGAAGCATTGCGTGCCAAAGTAGTAGTAAGCAAATCCACATGGGAAAGAAAGGTTGAATTGCATGGGAGGTGGGGTTGGTCCGATGAAATAGTTAATAAAGCATTTACTAAGCGTCCTTTCTGCATGCTGACATCTGACAGTAAAATTGAGGCTGTGATGGAATTTTGGGTCCACCACATGGGTTGGCATCCTCTGGTGCTTGCTGAAAACCCATTACTTATTACTTTTGAGTTTGGAGAATAG 717 0.4031 MSRPTRRKAPNYSQLRDTIKKVPGLLSGNPVKKISPKLEFLKSTGDSSSQLAQILTNNPWFLLKSLENHIIPSHYLIKRFIFSDEKTIPSIKRWPFLINDYRLAQKFQLLLDNGVLESRIALLLRHWPVLINLKIDELKTKVYEVKELRFHPSKSTFFEALRAKVVVSKSTWERKVELHGRWGWSDEIVNKAFTKRPFCMLTSDSKIEAVMEFWVHHMGWHPLVLAENPLLITFEFGE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2076 238 SMART mt_12 52 83 IPR003690 GO:0003690|GO:0006355
Glsi01g2076 238 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Glsi01g2076 238 SMART mt_12 16 47 IPR003690 GO:0003690|GO:0006355
Glsi01g2076 238 SMART mt_12 121 151 IPR003690 GO:0003690|GO:0006355
Glsi01g2076 238 Gene3D Transcription termination factor 3, mitochondrial 74 237 IPR038538 -
Glsi01g2076 238 Pfam mTERF 13 213 IPR003690 GO:0003690|GO:0006355
Glsi01g2076 238 PANTHER CGI-12 PROTEIN-RELATED 13 235 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2076 Glsi-ChrGlsi01 83942007 83944489 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi01g2076 mTERF 2.3e-16 No_clan