Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2075 ATGTATGATAGTTATTGCAAATCGCTGCTCGACCTGAAGGGTTTTCTACGAACCTCACCGATTCCAAGGTTACGTGTTCTTCTACAGCATAGTCCCTCTCCATTATCATCATCGTACAGCTCGGCCACAAGCACTTCAAACAGGCAGTGTTTCACGGGGAGGTACCTCGTCCACAATTGTAGTTTCTTCTCAGAAACCGCATCAGAGGCTTCCAAGCATGTCTCTTTTGCTGACTCGGAGAAGCCAGACTCTGTCCTCAAACTCTTCAAAAACTTCGATATTTCGGAGTCTCAGTTGCGTGATACCATTAGAAGGGCACCTTTTCTGCTTTCAAGCGATCCTGTGAAGACTATATCGCCCAAGCTCGAGTTTTTCAAGTCTAAAGGTGCTTCAACCTCCCAAGTTGCCCACATCGTGACCAATAACCCTTGGTTTTTGCAGAAAAGCTTAGTGAATCATATAATCCCTTCTTATGATTTGATAAAAGGATTCCTTTTTTATGATGAAAAGACCATTATGTCTATAAAACGCAGTCCCAGTCTCCTCACTGATTATCGCCTGGCGCAAAAATTTCAGCTGTTGCTTGATAATGGGGTGCTTGAGTCAGGCATCGCTCTGCTACTTCGTCATTGGCCTGCCATAATCAACTTCAAAATAGATGAATTGAAAATGAAAGTTGAGGAAGTAAAGAAGTTGGGATTTTTGCCTTCAAAATCATTATTCATAGAAGCATTGCGCGCCAAAGTAGTAGTAAGCAAATCCACATGGGAAAGAAAGGTTGAATTGTATGGGAGGTGGGGTTGGTCCGATGAAATACTTAATAAAGCATTTACTAAGCGTCCTTTCTGTATGCTGACATCTGACAGTAAAATTGAGGCTGTGATGGAATTTTGGGTCAATCACATGGGTTGGGATGCTCTGGTGCTTGCCGAAAACCCAATACTTATTACTTTGAGTTTGGAGAATAGAATCATTCCTAGGGCTTCTGTCTTGCACTTTCTTCAATCTGAAGGTTTGATTAAGAATGCTAACTCTAGCCCCTATATTATGACTGAGGAGATGTTCCACCGGAAATTCGTGAATGGCTTTAAGAAAGAGGCTCCCAAGGTATTGAATCTGTATGAAGAGAAATTGCATCTTTCAAGATAA 1149 0.4186 MYDSYCKSLLDLKGFLRTSPIPRLRVLLQHSPSPLSSSYSSATSTSNRQCFTGRYLVHNCSFFSETASEASKHVSFADSEKPDSVLKLFKNFDISESQLRDTIRRAPFLLSSDPVKTISPKLEFFKSKGASTSQVAHIVTNNPWFLQKSLVNHIIPSYDLIKGFLFYDEKTIMSIKRSPSLLTDYRLAQKFQLLLDNGVLESGIALLLRHWPAIINFKIDELKMKVEEVKKLGFLPSKSLFIEALRAKVVVSKSTWERKVELYGRWGWSDEILNKAFTKRPFCMLTSDSKIEAVMEFWVNHMGWDALVLAENPILITLSLENRIIPRASVLHFLQSEGLIKNANSSPYIMTEEMFHRKFVNGFKKEAPKVLNLYEEKLHLSR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2075 382 Gene3D Transcription termination factor 3, mitochondrial 175 367 IPR038538 -
Glsi01g2075 382 PANTHER CGI-12 PROTEIN-RELATED 54 362 IPR003690 GO:0003690|GO:0006355
Glsi01g2075 382 Pfam mTERF 86 187 IPR003690 GO:0003690|GO:0006355
Glsi01g2075 382 Pfam mTERF 185 342 IPR003690 GO:0003690|GO:0006355
Glsi01g2075 382 FunFam Mitochondrial transcription termination factor-like 150 367 - -
Glsi01g2075 382 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Glsi01g2075 382 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Glsi01g2075 382 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Glsi01g2075 382 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Glsi01g2075 382 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2075 Glsi-ChrGlsi01 83940128 83941276 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi01g2075 mTERF 7.7e-20 No_clan