Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2057 ATGGCGATTCTACTTCCGTGCGCGCCGAATATAGTCTCTGCTCCTTTCTCGAACCGGACGAGCACAACGAACCCTCTCTTCCACCGACCTCACCACCACGCTCTCTCCTATTCCAAGCACTTCCTTCGCGGTTCGCTTTCCGTCGCGAGGTTCGGCTTCGAGCCTGGTTTCTTTCCGGAATCCCATGGCGCCGAGGAGGTCATCAAGGACCTGCTGAGTCGAGCTGACGCTTTTCTATACACAGTTGCTGATGCCGCCGTTTCATCTTCTGATACGGTGACAACTTCCGCCCAACAGAATAATGATTGGCTTTCCGGTATTACTGGTTACATGGAGAGTGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCACGTACCATATGCTTATGGTTTTGCAATTATACTCCTCACGGTTCTTGTTAAGGCTGCCACATTTCCATTGACAAAGAAACAGGTAGAGTCTACCTTGGCTATGCGGTCTTTGCAACCTCAAGTAAAGGCTGTTCAGCAGCGTTATGCTGGGGATCAGGAAAGAATCCAACTTGAGACTGCTCGGTTGTATAAATTGGCTGGCATTAATCCTCTGGCAGGATGCCTGCCTACACTTGCAACAATACCAGTGTGGATTGGGCTATATAGAGCTCTATCAAATGTGGCCGATGAGGGACTTCTTACAGAGGGTTTCTTCTGGATACCTTCCCTTGCTGGTCCAACAACAGTTGCTGCTCGGCAAAATGGCAGTGGTATCTCCTGGCTCTTTCCTTTCGTGGATGGTCACCCACCCCTTGGATGGTCAGATACATTGGCATACCTTGTATTGCCTGTATTGCTGATTGTCTCTCAGTACGTCTCTGTCCAAATAATGCAATCTTCACAGGCTAATGATCCCAACATGAAGAGTTCTCAGGCCTTAACTAAGGTCCTTCCATTAATGATTGGTTACTTTGCTCTGTCAGTTCCTTCTGGTCTAAGCCTATACTGGTTCACAAATAATATATTGAGTACAGCACAACAAGTATGGCTTCAAAAACTTGGGGGAGCCGAAAATCCAGTGATGCAAGTACCTGATGATATAATGAAGGACAATCTAATGCAGCTTCCAAAATCTGAAGCCAAAAACCCAGGGATGCAGGTACGTGATGATATAATAAAAGACAACCTAATGCAGAAACAGAAGTCAGTCTCTGAGCTAAATACAACAGAAAAGGAGGCCAGGCAACATGAGAAGTTGAAATCAGAGGGGCTACAACCTGGTGAAAGATTTAAGCAATTAAGAGAGCAAGAAGCAAGGAGAAGACAACAGAGAGAGGAGGAAAAAAGGAAAGCTGAGGAGGCAGCAACTAAAGTACATGAGGCATGGGAGAAAACAAATCAAGTGGGAAGTGAGGGTAGAGATGATTTAGCTGTTGAAAAATCTCATGATCCATCCTCTTCTGGTGTTGTTGTAAATGGCAATCCATCCAATGAGGACTTGGAGGGACATCAGAATGCTTCATCTACATCTCAGACAGAAAATGTTGAAGGTTCTGCTAATTTCCAGTTTGATGAAAGGAATGAGAGAAGTCTTGAAAAGGAAACAGTGGAAGAAGTATTTACAACTACAGCTGCCACAGACAAGTCTCTTCGGGAAGACCCAGACCATGTGACAAGGGATTGA 1662 0.4567 MAILLPCAPNIVSAPFSNRTSTTNPLFHRPHHHALSYSKHFLRGSLSVARFGFEPGFFPESHGAEEVIKDLLSRADAFLYTVADAAVSSSDTVTTSAQQNNDWLSGITGYMESVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESTLAMRSLQPQVKAVQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLIVSQYVSVQIMQSSQANDPNMKSSQALTKVLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAENPVMQVPDDIMKDNLMQLPKSEAKNPGMQVRDDIIKDNLMQKQKSVSELNTTEKEARQHEKLKSEGLQPGERFKQLREQEARRRQQREEEKRKAEEAATKVHEAWEKTNQVGSEGRDDLAVEKSHDPSSSGVVVNGNPSNEDLEGHQNASSTSQTENVEGSANFQFDERNERSLEKETVEEVFTTTAATDKSLREDPDHVTRD 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2057 553 Coils Coil 423 448 - -
Glsi01g2057 553 MobiDBLite consensus disorder prediction 393 553 - -
Glsi01g2057 553 NCBIfam membrane protein insertase YidC 131 345 IPR028055 -
Glsi01g2057 553 Pfam 60Kd inner membrane protein 131 345 IPR028055 -
Glsi01g2057 553 MobiDBLite consensus disorder prediction 398 474 - -
Glsi01g2057 553 PANTHER OXA1 84 434 IPR001708 GO:0016020|GO:0032977
Glsi01g2057 553 MobiDBLite consensus disorder prediction 515 529 - -
Glsi01g2057 553 CDD 5TM_YidC_Alb3 132 345 IPR047196 -
Glsi01g2057 553 MobiDBLite consensus disorder prediction 478 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2057 Glsi-ChrGlsi01 83675312 83680814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2057 58 441 Chloroplast and Mitochondria Gene Families AT2G28800 51.026 4.05e-128 380