Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2050 ATGTGGCAAAAGCAGCCCCATAAATCTTCTTTCAGAGATTCTATCAAGGCTCTTGAAGCCGACATTCAACATGCCAATACCCTAGCAGCAGGTATTCCTCGAGATTATGGTGGGGACCATATTCAGATGAAATTATCTTACAGCCCTCTTGCTCCTTTCTTCTTGTATTTGGTCGAATGGATGGATTTTAGCTGTACAGATACTTTACCCACTTGTTTGGGTTTATTCCACATCCTTATATACGAGGTATACGTGAATGGAATGCCATCCTTGTCCTCAAAAGAAAGGAAAGCCACTCTTAAGGAATTTTATGCTGTAATATACCCTTCACTGAGGCTACTTGAAGGGGAGTTTAATGCATCAAACAATGATCGCAGAAGCAACAGCGCAGAAATTGTGAGCAGAAAAAAACCAGAAAAGGCTTTTGATAAAGAACAAGAGAGAGATGATGAATGTGGCATCTGCATGGAAACCAGCATGAATATGGTGCTGCCTAATTGTGGCCATTCCTTGTGCATCAGCTGCTTCCATGATTGGAATATGAGATCAGAATCCTGCCCATTCTGCCGTGGGAGCCTCAAGTGGGTGAGTCAAAGAGATTTATGGGTTGTTATTGGGAACAATGATGTAATTGATAGAGTGAGTCTCGCAAAGGAGAATTTAAGATGCTTCTACCTTTACATGGAAACACTGCCTCTTATTATGCAGGATTCACATGTATTTCTGTATAACTACATGCTATGA 744 0.4113 MWQKQPHKSSFRDSIKALEADIQHANTLAAGIPRDYGGDHIQMKLSYSPLAPFFLYLVEWMDFSCTDTLPTCLGLFHILIYEVYVNGMPSLSSKERKATLKEFYAVIYPSLRLLEGEFNASNNDRRSNSAEIVSRKKPEKAFDKEQERDDECGICMETSMNMVLPNCGHSLCISCFHDWNMRSESCPFCRGSLKWVSQRDLWVVIGNNDVIDRVSLAKENLRCFYLYMETLPLIMQDSHVFLYNYML 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2050 247 SUPERFAMILY RING/U-box 140 195 - -
Glsi01g2050 247 PANTHER RING FINGER PROTEIN 41, 151 8 243 - -
Glsi01g2050 247 Pfam Zinc finger, C3HC4 type (RING finger) 149 192 - -
Glsi01g2050 247 ProSiteProfiles Zinc finger RING-type profile. 152 190 IPR001841 -
Glsi01g2050 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 213 IPR013083 -
Glsi01g2050 247 SMART ring_2 152 189 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2050 Glsi-ChrGlsi01 83619210 83620959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2050 151 197 C3H Transcription Factor Family AT2G42030 43.137 7.10e-06 44.7