Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2037 ATGATGATCGAGGTTGTCTCCAATGATGAACTCCCACCACCGCCACCTCCATCACTCCAACAAACTCCTCAGCATCAAATGATCCTCGGTGAGAGTAGTGGGGATGACCACGAAGTTGAGATCAAGGTACCCAAGAAGCGCGCCGAGACTTGGGCACAAGACGAGACACGCAATCTCATTTCCCTTCGCCGTGAGATGGATGGGCTTTTTAATTCATCCAAGTCCAACAAGCACTTATGGGAACAAATATCAGCAAAGATGAGAGACAAGGGATTCGGTCGGTCGCCGACTATGTGCACGGATAAATGGAGAAATCTACTGAAGGAGCTCAAGAAGGCTAAGCACCAAGATAGGGGAACTGGGTCTACCAAGATGTCTTATCCCAAGGACATTGAGGAGATTTTGAAAGAGAGGAGTAAGGGTGTGTGCTACAAGAGCCCTACTCCTCCAAAGGTATTGAGGATACCAGCATCTCTTTTGGGCCTGTTGAAGGTCTTACTTGATTGTGGGGAAGGTCAGTCATGTTGCGGGAGGGTTATATCAGTCAAATGGGGCGATTATACAAGAAGAATAGGTATTGATGGTACTTTAGAAGCTATCAAGGAGTCAATAAGGGCTGCTTTTAGGTTGAGAACCAAACGTTTGTTTTGGTTGGAGGATGAAGATCAGATAATCAGAAGTCTTGACTGTGACATGCCTTTAGGAAATTACACTCTTCACCTTGATGGAGGGATGGCCATTAAAGTATGCCTCTATGATGAGTCTGATCATATCCCTGTCCATACAGAAGAGAAGATATTTTACACTGAAGATGATCACCGTGATTTTCTGACATGCCGGGGTTGGACATGCCTTAGGGAATTTGATGGCTATAGAAACATTGACAACATGGATGATCTTCGACCTGGTGCCATATACCGTGGTGTTGAGCGTTTAGACCCTGCATATTGA 951 0.4553 MMIEVVSNDELPPPPPPSLQQTPQHQMILGESSGDDHEVEIKVPKKRAETWAQDETRNLISLRREMDGLFNSSKSNKHLWEQISAKMRDKGFGRSPTMCTDKWRNLLKELKKAKHQDRGTGSTKMSYPKDIEEILKERSKGVCYKSPTPPKVLRIPASLLGLLKVLLDCGEGQSCCGRVISVKWGDYTRRIGIDGTLEAIKESIRAAFRLRTKRLFWLEDEDQIIRSLDCDMPLGNYTLHLDGGMAIKVCLYDESDHIPVHTEEKIFYTEDDHRDFLTCRGWTCLREFDGYRNIDNMDDLRPGAIYRGVERLDPAY 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2037 316 FunFam trihelix transcription factor GT-1 51 113 - -
Glsi01g2037 316 SMART sant 47 109 IPR001005 -
Glsi01g2037 316 ProSiteProfiles Myb-like domain profile. 43 107 IPR001005 -
Glsi01g2037 316 CDD GT1 49 114 - -
Glsi01g2037 316 Pfam Myb/SANT-like DNA-binding domain 50 133 IPR044822 -
Glsi01g2037 316 Gene3D - 51 112 - -
Glsi01g2037 316 PANTHER FI21293P1 27 309 - -
Glsi01g2037 316 MobiDBLite consensus disorder prediction 1 24 - -
Glsi01g2037 316 SUPERFAMILY Homeodomain-like 47 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2037 Glsi-ChrGlsi01 83547758 83552422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2037 1 309 Trihelix Transcription Factor Family AT3G25990 56.640 6.14e-135 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi01g2037 Myb_DNA-bind_4 1.1e-17 CL0123