Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2026 ATGGCGGCTGGAAGACATGGGGGTTATCGCGACAACGAGTTTAGGGACCGTGAGTCCAATTTTGACGTTTCAAGGCGGGGTTTGACCAATTCTAAAGAAGAGTACGATCGTAGTAGGATTGGTAGCCGTGATGTTGTGAGGGATCGGAATAGGGATGCAAGAGATAGGATTAGAGTGAGACAGAAGGATATTAGGGAGAGAGATGTGTTGAATGGTAGTTATCGCTCATCTTCGAGTAGGAGTGACTCAGGGAGCAGCGGTGGCCTTGGTCCGAGAAGATGTGGTTTTTCTGTTAAGGCAATGGATAGGGAGCCAGGTGAGCTTTCCAGTGACAGTGGATCGGATGATGCTATTGAATCAGAACCACATACGAAAGATTGTGAGGTTGCAAAAGTTGAAACAAATGGGACTCAATCTCCATTTGAGAGGAAAAGAAAATTTTCCCCAATAGTGTGGGATCAGGATGACAAAGAAGTAAATAATTCATCCAAAGTTAAGGTTTCTACAACAGTGATGACTCTTCCCCCTCCACCACCACTGCCAAGAGCTTTCCGTCAGTCCTCTAAGTCTCCATATGGAGGAGTTGAAATACATCCTGTCAATAATAGAGAAACTGGGAATCTTCAGTTGCCTACAGCAGTTAAACCTCCTCAGCCCTCTGAATCAGTTCAGGATGTTGATACTGAGTCTTCTGTAGGAGTGCTTCCTTTGTCACCAGATCAGAAATGGGGTAATGATCAGGAAGCTGAGCAGCTAGAGGGTGACGATTATGTTCCAACTCATAATATATCATCTTCAAGATGGGCGGGTAGGGATAACTCTCCTGGCGATGAAGGTGAAATTGTAGATGATGATGAATTTCCCAAAAGGAGGAGAAGAGTATCTCCTGAGTTCTTGGATACCAGAGTTAGAAGCAAGCTGTTGAGCCCCGAGGAGTTTAAAAGAGAAGGTTTTGAAGGAGCTAGAGCCAAATCATCTGAATCTGAAGAAAGATGTAGCCACGGTAAAATGTCCAGTGGGGATGATCATACTGGTATTGGATCAGAGAAGGATGACTATATGGAAATTGATGGTCAAGGTATCAAAAGTGAAACTAGTGTTAGTCATTCAGATACTGGTTCTGAAGATGAAGACGATGAACGGGAGACTCCAGAGCCTCCAGCACCACCACTAAGAGTTGTCAACATGCTTCAGGGTTGTAGAAGTGTAGATGAGTTTGAGAGACTAAACAAGATAGATGAAGGAACTTATGGTGTTGTATATAGGGCCAAAGACAAGAAGACTGGGGAAATTGTGGCATTGAAGAAGGTGAAGATGGAGAAGGAGAAAGAAGGCTTTCCACTGACCTCTCTTAGGGAAATAAACATCCTTCTTTCTTTTCACCACCCGTTCATAGTTGATGTTAAAGAAGTAGTGGTAGGGAGTAGCCTTGATAGTATTTTCATGGTGATGGAATACATGGAACACGATCTTAAAGGACTAATGGAGGCAATGAAGCAGCCATTCAGCCAGAGTGAAGTCAAGTGCCTTATGCTTCAGCTTTTAGAAGGTGTGAAATATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCAAACCTGCTTTTGAATAATAGGGGTGAGTTAAAAATTTGTGATTTTGGATTGGCTCGTCAGTATGGGAGTCCATTGAAACCATATACGCACCTGGTTGTCACACTTTGGTACAGGGCACCAGAACTTCTTCTAGGAGCAAAACAGTATTCAACAGCAATTGATATGTGGTCTTTGGGTTGTATAATGGCTGAGCTATTGTCCAAAGAACCACTCTTTAATGGGAAGACTGAATTTGATCAACTAGACAAGATTTTCAGAACTCTTGGCACTCCAAATGAAACAATTTGGCCTGGATTCTCTAAGTTACCTGGTGTCAAGGTCAATTTTGTCAAGCATCAGTATAACCTTCTGCGTAAAAAGTTTCCTGCCACATCCTTCACTGGATCTCCAGTTCTCTCTGATTCTGGATTCGATTTGTTGAACAAGCTTCTTACATATGACCCTGAAAAGCGGATCACAGCAGAAGATGCTCTTAATCACGAGTGGTTTCGGGAAGTTCCTCTTCCCAAGTCTAAAGAATTCATGCCTACTTTCCCTGCTCAACATGCTCAAGACAGGCGGACGAGGAGAATATTAAAGAGTCCAGATCCTTTAGAGGAGCAGCGTCGAAAGGAGTTGCAGCAGGGTGAACTAGGGACTGGTGGTATTTTTGGCTAA 2259 0.4334 MAAGRHGGYRDNEFRDRESNFDVSRRGLTNSKEEYDRSRIGSRDVVRDRNRDARDRIRVRQKDIRERDVLNGSYRSSSSRSDSGSSGGLGPRRCGFSVKAMDREPGELSSDSGSDDAIESEPHTKDCEVAKVETNGTQSPFERKRKFSPIVWDQDDKEVNNSSKVKVSTTVMTLPPPPPLPRAFRQSSKSPYGGVEIHPVNNRETGNLQLPTAVKPPQPSESVQDVDTESSVGVLPLSPDQKWGNDQEAEQLEGDDYVPTHNISSSRWAGRDNSPGDEGEIVDDDEFPKRRRRVSPEFLDTRVRSKLLSPEEFKREGFEGARAKSSESEERCSHGKMSSGDDHTGIGSEKDDYMEIDGQGIKSETSVSHSDTGSEDEDDERETPEPPAPPLRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPFIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHAQDRRTRRILKSPDPLEEQRRKELQQGELGTGGIFG 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2026 752 Gene3D Phosphorylase Kinase; domain 1 392 488 - -
Glsi01g2026 752 MobiDBLite consensus disorder prediction 158 300 - -
Glsi01g2026 752 FunFam Cyclin-dependent kinase G-2 489 728 - -
Glsi01g2026 752 MobiDBLite consensus disorder prediction 714 752 - -
Glsi01g2026 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Glsi01g2026 752 MobiDBLite consensus disorder prediction 273 300 - -
Glsi01g2026 752 MobiDBLite consensus disorder prediction 1 141 - -
Glsi01g2026 752 PANTHER CELL DIVISION PROTEIN KINASE 404 703 - -
Glsi01g2026 752 Pfam Protein kinase domain 406 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2026 752 MobiDBLite consensus disorder prediction 71 86 - -
Glsi01g2026 752 CDD STKc_CDC2L1 400 697 IPR045267 GO:0004674|GO:0005524|GO:0006468
Glsi01g2026 752 MobiDBLite consensus disorder prediction 8 70 - -
Glsi01g2026 752 Gene3D Transferase(Phosphotransferase) domain 1 489 729 - -
Glsi01g2026 752 ProSiteProfiles Protein kinase domain profile. 406 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2026 752 FunFam cyclin-dependent kinase G-2 isoform X1 391 488 - -
Glsi01g2026 752 MobiDBLite consensus disorder prediction 202 235 - -
Glsi01g2026 752 SMART serkin_6 406 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2026 752 MobiDBLite consensus disorder prediction 315 358 - -
Glsi01g2026 752 MobiDBLite consensus disorder prediction 97 130 - -
Glsi01g2026 752 SUPERFAMILY Protein kinase-like (PK-like) 398 703 IPR011009 -
Glsi01g2026 752 MobiDBLite consensus disorder prediction 315 391 - -
Glsi01g2026 752 MobiDBLite consensus disorder prediction 717 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2026 Glsi-ChrGlsi01 83485199 83488366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2026 397 743 Core Cell Cycle Gene Families AT5G10270 45.600 1.88e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Glsi01g2026 Pkinase 1.2e-75 CL0016