Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2000 ATGGCTTCCGCTTGGGCTTCCTCCGCCATTGCTGCTGTTTCCATCGCTTCCCCAAGTTCCCAGAAGAACGGATCCCTCTTGGGAACGACAAAAGCTTCTTTTCTTAGAGGGAGGAAGTTGAAGGTGAACAAGTTTACACCGCCGGTAGGAGGACGATCGGCCACTACAGTGTGTACACTAGCAGCCGACCCCGATAGGCCTCTCTGGTTCCCGGGCAGCACCCCTCCTCCATGGCTTGATGGCAGCCTCCCAGGAGACTTTGGGTTCGACCCTCTAGGTCTTGGATCTGATCCTGAGAGCCTGAGATGGAACGTTCAAGCAGAGCTAGTACACTGCAGATGGGCAATGTTGGGAGCTGCTGGGATTTTCATCCCAGAATTCCTAACAAAGATTGGTATTCTGAACACCCCGTCTTGGTACACAGCTGGAGAGCTGGAATACTTCACAGACACCACCACCTTGTTCATAGTTGAGCTTTTTTTCATTGGATGGGCAGAGGGTAGAAGATGGGCTGACATAATCAAGCCAGGATGTGTCAACACAGACCCCATCTTTCCAAACAACAAGCTCACAGGGACGGACGTTGGGTACCCAGGTGGGCTTTGGTTTGATCCCCTGGGATGGGGGAGTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACAAAAGAGATCAAGAATGGAAGATTGGCCATGTTGGCTGTGATGGGTGCTTGGTTCCAGCACATTTACACTGGTACTGGTCCTATCGACAACCTCTTTGCCCACCTAGCAGATCCTGGTCATGCCACCGTATTTGCTGCATTCACACCCAAGTGA 816 0.5184 MASAWASSAIAAVSIASPSSQKNGSLLGTTKASFLRGRKLKVNKFTPPVGGRSATTVCTLAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2000 271 Pfam Chlorophyll A-B binding protein 75 241 IPR022796 -
Glsi01g2000 271 SUPERFAMILY Chlorophyll a-b binding protein 61 269 - -
Glsi01g2000 271 FunFam Chlorophyll a-b binding protein, chloroplastic 76 261 - -
Glsi01g2000 271 Gene3D Chlorophyll a/b binding protein domain 76 261 - -
Glsi01g2000 271 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 53 269 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2000 Glsi-ChrGlsi01 83300428 83301776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2000 46 271 Chloroplast and Mitochondria Gene Families AT3G61470 88.053 3.55e-149 416