Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1971 ATGTTCTCTACAACAATAGCCATTCCAGCGTTCCTCCTTTTGACATTCATATACCTTCTCTTTGGCTTCTTGCGCCCAAATCAGAGCAAAGATGCTCAGAAACGTCCACCAGGTCCCCCAACTCTGCCAGTTATAGGCAACCTCCACTTGTTAGGTGCACTCCCCCACCGCAACCTTCAATCCTTGGCCATAAAATATGGTCCCATAATGTCCTTGCGGCTGGGACGTGTCCCCACCATTGTGGTCTCCTCCGCCGAGACTGCACAACTATTCCTTAGAACTCATGACACTGTTTTCCCTAGCCGCCCCAAAAATCAAGCAGCAGATTACATATTTTTCGACGGTAAGGGTTTGGCATTTACTTATGGTTCATTCTGGCGCAACATCAGGAAATTGTGCACCATACATCTTCTTAGTGCTTCAAAAGTTGAGTTGTTTTCTCCTTTAAGGCGGGAGGAGCTGCAGCTAATGGTGAAGTGCCTTGAGAAAGCCGCAGCGAAGGGTGAGTCTGTGGACCTTAGCGAGAGGGTGCATGGCCTTTTGGAAGATATAGTTTACAAGATGATATTGGGACGTAATAAGGATGACAAATTTGACTTGAAGGGGCTTGTCAAAAAGGGACTCGCCATGGCTGGAGCTTTTAATATAGCTGATTATGTGCCTTGGCTAGGAGCATTTGATCTTCAGGGATTCACACGAAGCTTAAAGGAAACAAGAAAAGCACTAGACGAAGTGTTGGAGAAGATTATCAAGGAGCATGAGGAGGTTCCTAATGTAAAAGGTAGGCAGCATCGGGACTTTATAGACATATTACTCTCACGGATGCACGAACCCGTGGATGATCAACAAAACCTTGTCATTGATCGAGATAATATAAAGGCTATTGCATTTGAGATGATTACTGGTTCCTATGATCCTTCTGCTGTGGCGATCGAGTGGGCTATGTCTGAACTGTTGAGAAATCCAAAGGTGATGAAGACTCTACAAGATGAGCTAGAAACTGTGGTGGGAATGAATAGAATGGTGGAAGAGACTGATTTAGCAAAGTTGAATTACCTGAACATGGTGGTCAAGGAGACTTTGAGACTGCATCCAGCTGGGGCATTTATCCCTCGAGAGTCAACTGAGGATGTCAAGGTAGATGGATACTACATAGAGAAAAAGACAAGAATCCTAATAAATGTATGGGCAATAGGACGAAATCCTAAGGTATGGTCGGATAACGTTGATGTTTTTTATCCAGAAAGGTTCTTCAACAGCGACATAGATCTTCAAGGAAATGATTCCCAACTTATACCATTTGGTTCTGGTCGCAGAAGATGTCCTGGGATGCAAATGGGTCTAGTTACAGTTAAACTTGTTTTAGCTCAACTAGTGCACTGCTTCAATTGGGAGCTTCCTTGTGGAATGGCACCAAGTGACTTGGACATGACCGAAACATTTGGCTTGACGATTCCAAGATCTAAGCACTTGTTTGCTGTGCCAACTCATCGTATACTTAAAACTTAG 1509 0.4414 MFSTTIAIPAFLLLTFIYLLFGFLRPNQSKDAQKRPPGPPTLPVIGNLHLLGALPHRNLQSLAIKYGPIMSLRLGRVPTIVVSSAETAQLFLRTHDTVFPSRPKNQAADYIFFDGKGLAFTYGSFWRNIRKLCTIHLLSASKVELFSPLRREELQLMVKCLEKAAAKGESVDLSERVHGLLEDIVYKMILGRNKDDKFDLKGLVKKGLAMAGAFNIADYVPWLGAFDLQGFTRSLKETRKALDEVLEKIIKEHEEVPNVKGRQHRDFIDILLSRMHEPVDDQQNLVIDRDNIKAIAFEMITGSYDPSAVAIEWAMSELLRNPKVMKTLQDELETVVGMNRMVEETDLAKLNYLNMVVKETLRLHPAGAFIPRESTEDVKVDGYYIEKKTRILINVWAIGRNPKVWSDNVDVFYPERFFNSDIDLQGNDSQLIPFGSGRRRCPGMQMGLVTVKLVLAQLVHCFNWELPCGMAPSDLDMTETFGLTIPRSKHLFAVPTHRILKT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1971 502 FunFam Cytochrome P450 83B1 23 494 - -
Glsi01g1971 502 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Glsi01g1971 502 Gene3D Cytochrome P450 26 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 CDD CYP71-like 65 491 - -
Glsi01g1971 502 Coils Coil 228 255 - -
Glsi01g1971 502 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1971 502 PANTHER CYTOCHROME P450 93A3-LIKE 13 499 - -
Glsi01g1971 502 Pfam Cytochrome P450 36 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1971 Glsi-ChrGlsi01 83141057 83142986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1971 36 494 Cytochrome P450 AT3G48310 40.476 3.58e-125 372