Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1952 ATGCAAGGATCAAGACTGTCCCTACATGGAAAGGCATCTCTGCCTGAGCTATATGCATATGGTGTTGGATCCAATGATAGAGAGGCACATCATGAGCTTCCCGTGGTGATCCCGGTTGGTATAGAACAAGTACAGAATGGTGATGATGATGTCGATCTTAACTTGACTCTACCTACCATACCCTCCACATGTTCAAAATTTATGGCTAAAGCAGTGGTGAAAAGAAAGAATAAGTGTGAAACTGATAATTGGTATCCAGCTATGGCTTGTGGCAATTTCAAGACCATGAGTCTTCTCAGTTCTGCAATTGACAAGGCCTTCAACACATGTCAGAAGGAGAATAAAATATTTCTTTCACCTTATCTTGAAGTTCTATTGAATTCTGCTTTGGAAATGGGAGTTGAGAAAGAAGGGACAAAAAGTGGAGGATATGTTGGCGGTTTATTCCACTTGTTTGACTGGACCTCAAAATCTCGGAAGAAATTATTTGCAACCAAGTCAGATTTGCCAGAATCTTCAAAGCAGGGGAAAAAAATTGATGGCAACATGGCAGCGAAATGGCCTTATGTGGTGGATGACGATGGTTTTGGAGTAGGACCAAGCGTTAGAGGAAGTACTGATCATAGTTATGCTTCATCAGTTACAGATGATGAACTAAGTGGAGCAAGAGCCCCTGGGGTAGTTGCTAGGCTTATGGGATTAGAATCCTTACCAACTTCCGGTTTTCCTGATCCCTATTCTACCCCATATTTTGATACTCTATCTCTCCAAGATGATAAGTATTGCAAGAAAAATTTCAATTATCAGCTCGACCATCAAACTGTTTATTCTGGAAATTTGCTTGAAAAAGTTGAGGGCTCTTCTAGGAAATTCACGGAGCCAAAGCCTCAAAAGATCCTTAGCAGGCCAATTGAAAAGTTTCAAACAGAAGTGCTGCCTCCAAAATCAGCCAAGTCAATTCCTGTTACACACCATAAACTTCTGTCACCTATTAAGAGTCCTGGCTTTATTCCAACCAATAATGCTGCTTATATAATGGAGGCTGCGGCAAGGATTATTGAACCTGGACCCCAAGCTACTGCAAGGACTAAAACACCTCTGATAGCATCATCTACTGTGTCATTAAAGGTTAGAGATCTCAAAGAAAAAGTTGAATCTTCACAAAAGGGACCTCTAGTTGGGTCATCTTCAGCAACTTCTAAAGTTCGAGGTACAAAGGAAAAAAGAGAGGTTTCACATAGAACAACCAGGTTTGCTGAACCTTCTCAAAGGTCAATTGAGTCAAATGCTGCCAAATACCTCAAGGGACAATCTTTGAACAAAAGCTGGAATGGATGTGTGGATACATCCAAAACTCCTACTGATGCAGAAGAAGATTCTTCTTTAAAGAATAAAGGAAAGTCGATTTCGCTTGCAATCCAAGCCAAAGTGAACGTTCAAAGAAGGGAAGGTTTAGGCTCGAATGGTGGCAGAAGTTCAGTGGGCCAGAAAGAACATCTTGAGGTTAAACCCAACCAGCCATTGAAGACAAATGCTCAAAAGAATTTGTGTAAGAAATCTACTGGTCAAAATGCTTCTGGCGTTCTCAGGCAGAATAATCAGAAACAGAATTTTTCAGTTGAAAAGGACAAATTAGCATCAAAGCCATCGGTTTCCAATTCACATTGTAGAAAAGTTCTGTCCGGGGATTCCTCTTGTGCACGTCACCGAAATTCTGGTAGTAAATCTGTGGCAAAGTCCAAGGTTGGATCCAGGAAGTCAGGCATGGAAGTGACAGATAGTGAAAAAGAAGTTTTATATACCAGTACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGAGTGGAATGATCGGGTTGTTGATAATTTGTTCATTGACAAGACTAAGAAGCCTGTTCAGTCTAATCTAGTAAGTAATAACTCTAGTTGGGCAGAAGAAGTCAAGAAGAAAGACATGGATGTAGTTTCATTCACGTTTACCACCCCACTAACAAGAAACAATCCTGGTTTAGAGACTTCTGGACAAGTTGGCCAGAAGACTAGTGGTCTTTCACTGGATCACCGCATTAAAAGAGTGCTGCTGCTTGACGCAGACAGAACAAGATCTCCAGTAGGATACAATATGATAGGCGGGGATGCCTTAGGTATTCTTTTGGAACAGAAATTAAGGGAACTGGCATATGGAGTTGAGACTTCTGAGGACTCTTTCAAAGTAAATCTACCTTCCAGTATTGCATCAAATTCAAAAGATCTGGTGTCCTCCCTTGATTCAATTAAGCTCGTTCCAAGGTTACAACAGAAGAAAGAACAAGTATTATTCAAAGATAAATCATACGGTAGACATGATTCTGACGCCTCCTTCACTGGTCTTCCTGGATTGACATCAAATCATAAGTCGCGGGTGTTTGATGAGATGGAAGAGTATAGAAGCAATCACGTGGAACCACTGATGTTCAATTGCCGACACCCAAGTCCAATTTCTGTTCTGGAACCTTCTTTTTCAACTGAAAGTTATGGATCTTCAGTCAGCACGGATGCTACTAATAGTACGGAAGGAAACAAGTTGTGCTCATCTGTTCAAGCTCAGGAAGTTCTTGGCTTGAATTTTTCAAGGAAGTTGTATACAACAGAAGCTGATACAGAGTTATCAGATTCAGCTTCCTCAACGTTAACTGCGACTACTGAACTACAGAAGCACAAAAGCACTTTTTCTGTCATGAAGTTTGGAAGATCAAGTACGTCAGAATTGGACTATGTGAAAGATATATTATGTAATGTGGAATTGATGTTTATGGATTTTGCCTTGGGTCGAGCACATGAGATCATAAGCCCGCATCTATTCAATCAGTTGGAAAGTCGAAAAGGAGGGTTTGAGAGTGGTGATAATGAGTCTAAGATAAGAAGGAGAGCTATATTTGATTGTGTAAGTGAACGTTTGGACTTAAGATGTGGGCGTTATGCTGGCGGTGGATATAAAATGTGGGCTAAAGGGGTTGCAATGGTAAGAAGAAACGAATGGTTGGCTGAAGAAGTGTACAAGGAGATATCAGGTTGGGGAGGCATGGGGGATTCAATGGTGGATGAGCTTGTAGACAAGGACATGAGCAGCCAAATTGGAAGATGGCTAGATTTTGATGTTGATGCTTTTGAACTGGGGGCAGAAGTTGGGGATCAAATATTCAATTCTTTGGTTGATGATGCTGTCGCTGATATCTTGCAATTATAA 3231 0.4082 MQGSRLSLHGKASLPELYAYGVGSNDREAHHELPVVIPVGIEQVQNGDDDVDLNLTLPTIPSTCSKFMAKAVVKRKNKCETDNWYPAMACGNFKTMSLLSSAIDKAFNTCQKENKIFLSPYLEVLLNSALEMGVEKEGTKSGGYVGGLFHLFDWTSKSRKKLFATKSDLPESSKQGKKIDGNMAAKWPYVVDDDGFGVGPSVRGSTDHSYASSVTDDELSGARAPGVVARLMGLESLPTSGFPDPYSTPYFDTLSLQDDKYCKKNFNYQLDHQTVYSGNLLEKVEGSSRKFTEPKPQKILSRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPGFIPTNNAAYIMEAAARIIEPGPQATARTKTPLIASSTVSLKVRDLKEKVESSQKGPLVGSSSATSKVRGTKEKREVSHRTTRFAEPSQRSIESNAAKYLKGQSLNKSWNGCVDTSKTPTDAEEDSSLKNKGKSISLAIQAKVNVQRREGLGSNGGRSSVGQKEHLEVKPNQPLKTNAQKNLCKKSTGQNASGVLRQNNQKQNFSVEKDKLASKPSVSNSHCRKVLSGDSSCARHRNSGSKSVAKSKVGSRKSGMEVTDSEKEVLYTSTNNFPRKKRSTDKEWNDRVVDNLFIDKTKKPVQSNLVSNNSSWAEEVKKKDMDVVSFTFTTPLTRNNPGLETSGQVGQKTSGLSLDHRIKRVLLLDADRTRSPVGYNMIGGDALGILLEQKLRELAYGVETSEDSFKVNLPSSIASNSKDLVSSLDSIKLVPRLQQKKEQVLFKDKSYGRHDSDASFTGLPGLTSNHKSRVFDEMEEYRSNHVEPLMFNCRHPSPISVLEPSFSTESYGSSVSTDATNSTEGNKLCSSVQAQEVLGLNFSRKLYTTEADTELSDSASSTLTATTELQKHKSTFSVMKFGRSSTSELDYVKDILCNVELMFMDFALGRAHEIISPHLFNQLESRKGGFESGDNESKIRRRAIFDCVSERLDLRCGRYAGGGYKMWAKGVAMVRRNEWLAEEVYKEISGWGGMGDSMVDELVDKDMSSQIGRWLDFDVDAFELGAEVGDQIFNSLVDDAVADILQL 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1952 1076 MobiDBLite consensus disorder prediction 546 581 - -
Glsi01g1952 1076 Pfam Domain of unknown function (DUF4378) 917 1068 IPR025486 -
Glsi01g1952 1076 MobiDBLite consensus disorder prediction 442 464 - -
Glsi01g1952 1076 MobiDBLite consensus disorder prediction 402 417 - -
Glsi01g1952 1076 MobiDBLite consensus disorder prediction 506 540 - -
Glsi01g1952 1076 MobiDBLite consensus disorder prediction 480 594 - -
Glsi01g1952 1076 MobiDBLite consensus disorder prediction 382 424 - -
Glsi01g1952 1076 Pfam DUF761-associated sequence motif 212 242 IPR032795 -
Glsi01g1952 1076 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 130 1072 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1952 Glsi-ChrGlsi01 82904931 82915416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1952 146 1074 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.980 6.17e-96 322