Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1946 ATGGCTTCGGATTTTCGTGTTTGCTGCTTCTTCAACATCGCTGTCTTACTCATCTTCGTCGCAATGACACCCTCGATTTCTTTGGCTCAATCTGCCGATTCCTGCAACGGAATTTTCTTGTCGTACGCCTACACCGGCGGAAGGCGGCTACCTCCGAATGTCTCCGACCCCTCCAAGCAACCGTACCGGTTTGAGTCCACGCTTACTGTGCTCAACAACGGACTGGACGAGCTCAAGTCTTGGAGGGTTTTTGTGGGGTTTCAGCACGATGAGTGGTTGGTCTCTGCTTCAAATGCAGTGCTTTCCGATGGCACTGGCCTCCCTGCCAGTGTCGGAAATGGCACCGTTTTTGCTGGCTACCCCATGACTGACCTCAAGACGGCGGCGGAGACCGCAGGGGACTTGACGCAGTTCCAGGTTCAGATCAATTTGGTTGGGGCTATGTTCGGCGTGGCGCCACCCGACTCGCCGATGCCGTCGAACATCACCCTGGCCAATAATGGGTTTGTCTGTCGTAAACCCACCGATCAAGGGAAGAATGAGACTCACGTCTGCTGCACAAAAGATCCCAAGTTCAAAACAAACATCAACACAGAGGAAGAATTTTCAGACCGCCAGAATGGCGATCTTACAATTATGTATGACGTGATCAAAACTTACGATTCCAGTTACTGGGCAGAGGTTACAATCGCAAATCATAACCCCCTTGGTCGTCTTGACAACTGGAGATTAAGCTGGGACTGGATGAGGAATGAGTTTATTTATTCAATGAAAGGGGCTTATCCATCTGTTGTGGATTCTTCTGACTGTGTCTTTGGCCCGCAAGGTGTATACTACAAGGATCTCGACTTTTCCAATGTATTGAATTGCGAGAAAAGGCCAACTATAATTGATCTCCCTCCCACAAAGTTCAATGATTCAGACCTTGGAAAAATTCCCTTTTGCTGCCGGAATGGTACTATCTTGCCACCATCAATGGACCCGAGTATGTCAGCTTCAAGATTCCAATTGCAGGTCTTCAAGATGCCACCAGAACTTAATCGTTCCCGGCTTGCGCCACCACAGAACTGGAAGATAAGTGGTACACTCAACCCTGACTACAAATGCGACCCTCCAGTTAGGGTAAGTCCTAGTGAAAGCCCAGATTTAACAGGCTTACCTTCCAACAAATCTGCAATGGCGAGCTGGCAGATTGTGTGCAATATAACAAAGGCCGACGGGAGAGTACGAAAATGCTGTGTCTCATTTTCTGCTTATTACAATGAATCCGTCATTCCTTGCAAAACATGTGCATGTGGATGCCCCAGCAACACAGGAAGAACTTGTAGTTCAATTGCACCGGCTATGCTGCTTCCACCAGAGGCATTGCTTGTTCCTTTTGAGAATAGGACTGCCATGGCTGTTGATTGGGCTGGTCTGAAACATCTAACAGTGCCAAACCCTATGCCCTGTGGTGATAACTGTGGTGTTACCATCAACTGGCATGTACTGACAGACTACAGCCGAGGATGGAGTGCAAGGATCACACTTTTCAATTGGGGTGAGACTAATTTTGCAGACTGGTTTGCTGCAATACAAATGGACAAAGCTGTTGAAGGTTTTGAGAAAATGTACTCTTTCAGTGCAAGCACCTTGGACGGTGTGAATAATACAATATTGATGCAAGGTATTGAAGGATTGAACTACCTTGTGGCAGAAACAAATGGAGCTGACCCTCAGAAAGATCCCAGGGTGCCTGGTAAACAACAATCAGTGATCTCATTTACAAAGAAAACTACTCCTGGGATCAATGTGGCTAGTGGAGATGGATTTCCCAGTAAAGTCTTCTTCAATGGGGAGGAATGCTCTCTTCCTTCTGTATTTCCAAGCAGTGGTTTCAGGAAGGAGTTTTCCTTGGCTACTCCATTGTTCCTAACACTCTTTGTGCTCATCTTGATGCGGCAATAG 1947 0.473 MASDFRVCCFFNIAVLLIFVAMTPSISLAQSADSCNGIFLSYAYTGGRRLPPNVSDPSKQPYRFESTLTVLNNGLDELKSWRVFVGFQHDEWLVSASNAVLSDGTGLPASVGNGTVFAGYPMTDLKTAAETAGDLTQFQVQINLVGAMFGVAPPDSPMPSNITLANNGFVCRKPTDQGKNETHVCCTKDPKFKTNINTEEEFSDRQNGDLTIMYDVIKTYDSSYWAEVTIANHNPLGRLDNWRLSWDWMRNEFIYSMKGAYPSVVDSSDCVFGPQGVYYKDLDFSNVLNCEKRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQLQVFKMPPELNRSRLAPPQNWKISGTLNPDYKCDPPVRVSPSESPDLTGLPSNKSAMASWQIVCNITKADGRVRKCCVSFSAYYNESVIPCKTCACGCPSNTGRTCSSIAPAMLLPPEALLVPFENRTAMAVDWAGLKHLTVPNPMPCGDNCGVTINWHVLTDYSRGWSARITLFNWGETNFADWFAAIQMDKAVEGFEKMYSFSASTLDGVNNTILMQGIEGLNYLVAETNGADPQKDPRVPGKQQSVISFTKKTTPGINVASGDGFPSKVFFNGEECSLPSVFPSSGFRKEFSLATPLFLTLFVLILMRQ 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1946 648 PANTHER COBRA-LIKE PROTEIN 7 29 644 - -
Glsi01g1946 648 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1946 Glsi-ChrGlsi01 82865831 82868210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1946 35 632 COBRA Gene Family AT4G16120 67.164 0.0 863