Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1930 ATGTTGGATGGTTTGTTTGTTTATCTGTTGATGTCCGGTGGCGGTCCCCGCTACGTTCAAATGCAATCGGAGCAGTCGACGGCGATGTCGTCCGTCGCCTCGTTCCGGCAAGGCGGCCCTGAGCCCACTCGGATTTTCGATGAGTTGCCCGAAGCCACCATCGTCTCCGTCTCTCGTCCCGACGCCGCCGATATCAGTCCCGCTCTTCTTTCTTACACAATTGAGTTTCGATATAAACAGTTCAAGTGGCAGTTAGTGAAGAAAGCTTCTCAAGTATTTTATTTGCATTTTACACTGAAGAAACGTGTCTTTATTGAGGAAATTCACGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCACAATCTAGGAATGGGAGAAAACACTACTATGGTGCAAGATGATGATGAAGCTGACGATGAAACTGTTCCTCTACATCATGATGAAAGTGCTAAAAACAGAGATGTTCCATCTAGTGCTGCTCTATCAATCATACGGCCGGCCTTGGGAAGACAGCAGTCTATATCAGAGAGAGCAAAGATTGCGATGCAAGGATATCTGAATCACTTTTTGGGAAATCTCAGTATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTCTCACCTGAATATGGCCCTAACCTGAAGGAAGATTATGTGATGGTGAAACATCTGCCAAAAATTCCTAAGGATGATGATTCTAGAAAATGTTGTATATCTCAATGTTTTAATTGTTGTAATGACAACTGGCAAAAGGTTTGGGCAGTACTAAAACATGGATTCTTGGCATTGCTGGCTGATCCTTTTGATACCCAACCTTTGGACATTATTGTTTTTGACGTACTACCTGCCTCAGATGGGAATGGGGACGGTCGTTTATCACTAGCAAAGGAAGTGAAGGAACGAAATCCTTTACGCCATTCGTTCAAGGTGACTTGTGGAAACCGGAGCATTAGGATAAGAGTAAAAAGTAGTGGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTCAGGCCCCCTGAAGGCTGGTGTCATCCTCACCGCTATGGTTCTTTTGCTCCACCAAGAGGCTTGATCGAAGATGGTAGTCAGGCCCAGTGGTTTGTAGATGGCCGAGCTGCATTTGAGGCCATTGCTTCATCAATTGAGGATGCAAAATCAGAGATATTTATTTGCGGGTGGTGGCTGTGCCCAGAGCTGTATTTACGGCGTCCTTTTGACGCTCATGCTACATCAAGGCTTGATAATTTGCTGGAAGCAAAAGCTAAGCAGGGGGTTCAGATTTACATTCTTCTCTACAAAGAAGTGGCTATTGCTTTGAAAATCAACAGTGTTTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAACGTGAGGGTATTACGCTATCCTGACCATTTTTCTTCCGGCGTTTACCTGTGGTCGCATCATGAAAAGTTGGTCATTGTTGATCACCAGATTTGTTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAACACAAAGTGGGAGATTCCCCTCCTCTGATCTGGCCTGGAAAAGACTATTATAACCCTAGGGAATCTGAGCCAAATTCATGGGACGATACAATGAAAGATGAATTGGAGCGTAAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCATTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTCCTTATGAGCAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATCCCACACTACATGGGAAAAAGCAGAGAGATGGAGATTGAGAGCATGAATACTGACAATCATAGAGGCATCAAGAAGGAAGATTCCTTTTCGTCATCACCCCAAGATATTCCTCTACTTTTGCCTGAGGATTCTGATGGGATGGATAGTTCTGATGGAGAACCAAAATTAAATGGGTTAAGTTCCTTTTTGCATCACCTTGACCGACGAAGCAGGGTCAACAGTGATCATCCTTTTTTTTTCCGGAAGGCCAAAATTAAACCTGTAGGTCCAGATACACCAATGAAGGGCTTTGTAGATGATCTTGACTTTGTGGATTATCATGGGAAGATGCCTTTGGATAGAGTGACTCATGTTGGTATACATAGTTCGGACCCAGAATGGTGGGAAACACAAGAACGTGGTGACCAGGGAAGTTTTGCAGATGAATCGGGGCAAGTTGGTCCTCGTGCTTCCTGCCGTTGTCAGGTTATTCGGAGTGTCAGTCAATGGTCGGCTGGAACAAGCCAAACAGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAATACTTCATCTATATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGAGATGAGATGATACAAAATCGTGTTTTAGAAGCTTTATATCGACGGATTATGCGAGCTTACCATGATAAAAAATCTTTTAGGGTTATAATTGTCATACCACTCCTGCCTGGCTTTCAGGGGGGGCTGGATGATAGCGGTGCAGCATCTGTAAGAGCTATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAGAATTCTATATTACATAATCTATCAGATCTTCTTGGTCCAAAAATATATGATTACATCTCTTTCTATGGCCTTAGGGCTTATGGTAGACTCTTTGCTGGTGGTCCTGTGGCTACTAGCCAGGTGTACGTTCACAGTAAAATCATGATTGTTGATGACTGCACAACTTTGATTGGATCTGCTAATATAAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAATTATAGAAGACAGGGAGTTCATTGGTTCGTATATGGATGGAAAACCATGGAAAGCAGGAAAATTTTCTCTGACTCTCCGGTTGTCATTATGGTCTGAACACTTAGGTCTCCAAGCAGGAGAGATCAATCAAATAATGGACCCAATTGTTGAGTCTACTTATAAGGATATTTGGATGGCAACAGCAAAGACAAATACTGCAATTTACCAGGATGTCTTTTCTTGCGTACCTAACGATCTGATACACACAAGACTTGCTTTCAGACAAAGCACAACTTTCTGGAAAGAAAAAATTGGCCACACTACCATTGATTTAGGAATAGCCCCAGAAAAATTAGAATCCTATCATAATGGAGGTATCAAGAACACTGATCCTTTGGAGAGATTAGCATCAGTGAAAGGTCATCTTGTTTCCTTTCCCTTGGAGTTCATGTGTCAGGAAAATCTAAGGCCTGCTTTTAATGAAAGCGAATATTATGCTACTCAAGGATGCCTTTCTAGTGATTCCTTTGTTGCTTCCGGAGTCTCACCCCAGGCATACATCAATGTTTGCTGCTTCATTTGCGATAGCGCCAATGGCAACCAATCAGATCATCTCCAACTGTCTAGGAGAGTTTCTCGAATCCTCACTCGCCACATTATTGTGCTTGCGATTGCTATCACCTTGCTGGTTTCCGACCGTCGGCGAACCTCGTTTATCACTATGTTCTCCGGTCACTGGCATCACAACGTGAAGGAGCTCAATGATGAGTCCGATTTCGAAGCACTCGTCTCCCAAGACGGTTACATCTCGATTTGTGGCTTCGGCTCTCTTCTTTCCGAGAAAAGTGCGAGGAGCACTTTTCCGGACCTCATTAACTTCCGAATCGCCAGGATGAAAACTGAGGAGGTTGCAGCCCTCTCCGTAGAGCCTTGTGAAGGTGAAACCATTATAGTCACAGTTTTTGAGATTAAGAAATCAGAGATACCAGCATTTATTGAAAGGGAGCGCGTATGTCGATTTTTAACTATCATCCCTGAAGAGCTGGATGGGAAGCCTTTCCCCAGTCAAGCCGTATGTTATTCACATTTACTTGCAGCAATCTCGATATTCTTCATTTAG 3948 0.4303 MLDGLFVYLLMSGGGPRYVQMQSEQSTAMSSVASFRQGGPEPTRIFDELPEATIVSVSRPDAADISPALLSYTIEFRYKQFKWQLVKKASQVFYLHFTLKKRVFIEEIHEKQEQVKEWLHNLGMGENTTMVQDDDEADDETVPLHHDESAKNRDVPSSAALSIIRPALGRQQSISERAKIAMQGYLNHFLGNLSIVNSPEVCKFLEVSKLSFSPEYGPNLKEDYVMVKHLPKIPKDDDSRKCCISQCFNCCNDNWQKVWAVLKHGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLAKEVKERNPLRHSFKVTCGNRSIRIRVKSSGKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFVDGRAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFDAHATSRLDNLLEAKAKQGVQIYILLYKEVAIALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTSEHKVGDSPPLIWPGKDYYNPRESEPNSWDDTMKDELERKKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYMGKSREMEIESMNTDNHRGIKKEDSFSSSPQDIPLLLPEDSDGMDSSDGEPKLNGLSSFLHHLDRRSRVNSDHPFFFRKAKIKPVGPDTPMKGFVDDLDFVDYHGKMPLDRVTHVGIHSSDPEWWETQERGDQGSFADESGQVGPRASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIQNRVLEALYRRIMRAYHDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLSDLLGPKIYDYISFYGLRAYGRLFAGGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVIIEDREFIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLQAGEINQIMDPIVESTYKDIWMATAKTNTAIYQDVFSCVPNDLIHTRLAFRQSTTFWKEKIGHTTIDLGIAPEKLESYHNGGIKNTDPLERLASVKGHLVSFPLEFMCQENLRPAFNESEYYATQGCLSSDSFVASGVSPQAYINVCCFICDSANGNQSDHLQLSRRVSRILTRHIIVLAIAITLLVSDRRRTSFITMFSGHWHHNVKELNDESDFEALVSQDGYISICGFGSLLSEKSARSTFPDLINFRIARMKTEEVAALSVEPCEGETIIVTVFEIKKSEIPAFIERERVCRFLTIIPEELDGKPFPSQAVCYSHLLAAISIFFI 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1930 1315 CDD PLDc_vPLD1_2_yPLD_like_2 771 955 - -
Glsi01g1930 1315 Pfam Phospholipase D Active site motif 480 507 IPR001736 GO:0003824
Glsi01g1930 1315 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 911 938 IPR001736 GO:0003824
Glsi01g1930 1315 PANTHER PHOSPHOLIPASE D 144 1104 IPR015679 -
Glsi01g1930 1315 ProSiteProfiles PH domain profile. 254 345 IPR001849 -
Glsi01g1930 1315 SMART PH_update 219 347 IPR001849 -
Glsi01g1930 1315 CDD PH_PLD 196 343 - -
Glsi01g1930 1315 Gene3D - 248 345 IPR011993 -
Glsi01g1930 1315 Gene3D Endonuclease Chain A 367 605 - -
Glsi01g1930 1315 Gene3D Endonuclease Chain A 718 971 - -
Glsi01g1930 1315 SUPERFAMILY PH domain-like 252 343 - -
Glsi01g1930 1315 SUPERFAMILY Phospholipase D/nuclease 751 960 - -
Glsi01g1930 1315 CDD PLDc_vPLD1_2_yPLD_like_1 373 517 - -
Glsi01g1930 1315 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 480 507 IPR001736 GO:0003824
Glsi01g1930 1315 SUPERFAMILY Phospholipase D/nuclease 330 600 - -
Glsi01g1930 1315 SMART pld_4 480 507 IPR001736 GO:0003824
Glsi01g1930 1315 SMART pld_4 911 938 IPR001736 GO:0003824
Glsi01g1930 1315 Pfam PLD-like domain 784 958 IPR025202 -
Glsi01g1930 1315 MobiDBLite consensus disorder prediction 621 640 - -
Glsi01g1930 1315 FunFam Phospholipase 745 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1930 Glsi-ChrGlsi01 82740466 82757521 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1930 12 991 Phospholipase D Gene Family (Wang group) AT3G16785 74.520 0.0 1423