Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1926 ATGAGTTCGAATTACGGCAAGCCCAATCAACCGAAAGCCTCATCTGTCTCACTTAACAACTTTAATTTCGACTTTGATCTTGGGATCGGATCCAATCGATCCAAATCTCTCAACGATCAAAAAAGCCAGAACTCGTCCTATTCATATTCTACTTCTTCTTCTTCGTTTTCGTCTGCCCAACCAAGATCCGCGGGGCAACCAAGCAAGCCAGCTTGGACTCACCAGCCAGCGCCGAATCAGGTGACTCAGCCCGGATTGAATGGACCCGCTTCGATGGTTGGGGATATCTTTGGCAAGAGTTGGGGATCGAGCCGGCCTTCCGGTTCGAGTTCGACTATTGGAGTTGTTAATAAGAACCCAAATCTTTTTGGAGATTTGGTGAGCTCTGCTTTGGGTCAGGGTCCTAAGAGTAGCAATAGTACTCCTCTGAAAAATTCGACGCCTGTTTCGAAAGTATCAGGTGCCACATCGAACAAGAGTTCGTTTTCCATGGGAAATGTGGCGGATTCTTTGCCTAAAACTAGTAACACGACGCAAAGGAGTGGAGGTTGGGAAGCTTCTGGGAATTTGGGGAGTCATATTAGCGGATTCAATAATAATAGTTTGAACGCCAATAAAAGTCCGAATATTGGGGGTCCTTCAATGCGGAGTACGAATAGTGGCGGTGCAGCTGGAAGCGGAATGAATTTTAATAAAGATCCATTTAGCTCTTTGACTGGTTTTGGATCAAAAGAATCCGGTAGTCTTAACTCAGCTGGTAAGGGAGCAAAGAATAACACAGAGGATGATGGTTTTGGAGATTTCCAGAACGCTTCCAAACCAAGCTCTACCACATTCCCATCAAGCAGTTATACAGCAGATAATATTAGTTTTACTGGATCTACCAATTTGAATCAGAACCCTGTGCAGACATCCGGTAGTGATCCCTTGGACATGCTTTTCTCATCTTCCTCAGCCTCAGCTGGAAGTGCTACTATGGCCTCTGAAGGATTTGGAAAACAGCCCTTTTCTGAAGTTGATGATTGGGGCTTAGATTCTGAGTTTGGTGGTGGAGGCCATGATGTGGGTGGTACAACCACTGAGCTTGAAGGGCTTCCACCTCCTCCTGCTGGGGTATCAGGTTCCGCAGCAAAAGGTAAGGGGATGGACAATTACAAGCAGGGGCAGTTTGCCGATGCTATTAAGTGGCTGTCCTGGGCTGTCATCCTTTTTGAGAAAGCAGGGGATAATGCAGGCACAGTGGAGGTTTTGTCATGCCGGGCTTCATGTTACAAAGAAGTTGGGGAGTATAAAAAAGCAGTAGCAGATTGTACAAAGGTGCTTGAAAACGATGACACAAATGTATCTGTCCTAGTACAACGTGCTCTCTTGTACGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGAAATGTTCTGAAGATTGATCCTGGTAATAGGGTTGCAAGAAGTACCGTTCACCGATTGACAAAGCTGGCCGAATAG 1491 0.4588 MSSNYGKPNQPKASSVSLNNFNFDFDLGIGSNRSKSLNDQKSQNSSYSYSTSSSSFSSAQPRSAGQPSKPAWTHQPAPNQVTQPGLNGPASMVGDIFGKSWGSSRPSGSSSTIGVVNKNPNLFGDLVSSALGQGPKSSNSTPLKNSTPVSKVSGATSNKSSFSMGNVADSLPKTSNTTQRSGGWEASGNLGSHISGFNNNSLNANKSPNIGGPSMRSTNSGGAAGSGMNFNKDPFSSLTGFGSKESGSLNSAGKGAKNNTEDDGFGDFQNASKPSSTTFPSSSYTADNISFTGSTNLNQNPVQTSGSDPLDMLFSSSSASAGSATMASEGFGKQPFSEVDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSGSAAKGKGMDNYKQGQFADAIKWLSWAVILFEKAGDNAGTVEVLSCRASCYKEVGEYKKAVADCTKVLENDDTNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPGNRVARSTVHRLTKLAE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1926 496 PANTHER OS03G0340700 PROTEIN 1 496 - -
Glsi01g1926 496 MobiDBLite consensus disorder prediction 29 87 - -
Glsi01g1926 496 Gene3D Tetratricopeptide repeat domain 374 495 IPR011990 GO:0005515
Glsi01g1926 496 SMART tpr_5 374 407 IPR019734 GO:0005515
Glsi01g1926 496 SMART tpr_5 448 481 IPR019734 GO:0005515
Glsi01g1926 496 SMART tpr_5 414 447 IPR019734 GO:0005515
Glsi01g1926 496 MobiDBLite consensus disorder prediction 29 314 - -
Glsi01g1926 496 SUPERFAMILY TPR-like 376 486 IPR011990 GO:0005515
Glsi01g1926 496 MobiDBLite consensus disorder prediction 102 314 - -
Glsi01g1926 496 ProSiteProfiles TPR repeat profile. 448 481 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1926 Glsi-ChrGlsi01 82707073 82709109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1926 389 491 Calmodulin-binding Proteins AT3G25230 32.075 9.02e-10 59.3