Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1909 ATGCTGCGTCATAAACTCTCTATTTTGTTTGCCGTCTTCCTCATTTTGCTTCCTCTAGCGAAACCGGATCTGGGTTCTGAGCGAGTCGCTCTAGTGGCTCTCCGTTCGGCGGTTAGAGGCCGAACCCTTTTCTGGAACGTTTCTGAGCTGAGTCCCTGCGAGTGGGCTGGTGTTGAATGCGAGCATGACCATGTCGTCGAGCTACATCTTCCTGGTGTAGCTCTTTCGGGCCCTATACCCACTGGCATTTTCGGCAACTTGACTCACCTGCGCACTCTCAGCCTGCGGTTCAACGCCTTGAAGGGTGGCCTCCCTGTAGATCTTGCTTCTTGCGTCAATCTTCGCAACCTTTACTTACAGCAAAATTTGCTCTCAGGGGAAATCCCAGAATTTTTGTTTAGCTTACCAGACTTGGTTCGGCTTGATTTGGCGTCGAACAAATTTTCTGGTATGATTCCACTGGGTTTCAACAATTTGACAAGGTTGAGGACTCTGTTCCTCGAAAACAACCAGCTTTCAGGTTCCATCCCTGATTTGAACCTGGTAAAACTTGTGCAGTTAAATGTGTCAAACAATTTGCTAAATGGCTCAGTGCCAGAGAAGTTTCAGACATTTGCTGAAGATTCATTTTTGGGAAATTCGCTATGTGGGCGACCCCTTAAACTTTGCCCAGGAGATGGAACTGGAACTGGAACTGGAAATGGAACTTCTCCAGCTGCGGAGATTGAAAACAACGAGGGAAAGAGGAAAAAGAAGTTGTCTGGTGGTGCCATTGCTGGAATTGTGTTAGGATCTGCGGTGTGTCTTATGTTGATTCTTTTCGTTTTGATCATTTTGTGCCGAAAGAGGAGCAGTCAGAAGACAAGGTCAGTCGACATTTCATCTGAGAAGCATCCTGAAGTGGAAATTCCGGGTGAGAAATCAGTTTCCAATGTGGAGAATGGGGGGCAGAGTAATGGGTACTCAGTGGCGGCGGCAGCTGTGGCGGCAATGTCAGGGAATGGAAGCAAGGCAGAAGCGAACGATGGTGGAATGAAGAAGTTGACGTTTTTCGGTAATTCACCTAAGGTTTTTGATCTCGAGGATTTGCTAAGAGCATCAGCGGAGGTTTTGGGTAAAGGGACATTTGGGACAGCCTATAAGGCTGTTTTGGAGGCTGGGCCGGTGGTGGCTGTGAAAAGGTTGAGGGATGTGACAATTTCTGAGAGGGAATTCAAGGAGAAGATTGAATTTGTGGGAGCAATGGATCATGAGAATTTGGTACCTCTCAGGGCTTACTATTATAGCGGGGATGAAAAGCTTCTTGTTTATGATTACATGCCCATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGGGCGGGTAGGACACCACTGAATTGGGAAATCCGGTCAGGCATTGCTCTTGGTGCTGCTCGAGGCATTGGGTACTTACATTCACAAGGGACTAATGTTTCTCATGGGAACATTAAGTCATCTAATATCCTCGTCACTAGTTCCCTTGATGCCAGAGTATCTGATTTTGGCCTCGCACACCTTGTTGGTCCCTCCTCCACTCCCAACCGGGTTGTTGGCTACCGTGCGCCTGAGGTAACTGATCCTCGCAAAGTATCTCAAAAGGCAGATGTCTACAGCTTTGGTGTGTTGCTCTTGGAACTTCTGACTGGAAAGGCTCCTACACATGCTATCTTAAATGAGGAAGGAGTAGACCTCCCTAGATGGGTGCAATCTGTTGTTAGAGAAGAGTGGACCTCTGAAGTCTTTGATCTTGAGCTCCTCAGGTACCAGAATGTTGAGGAGGAGATGGTTCAGCTGTTGCAACTTGCGGTAGATTGTGCAGCCCCTTACCCTGATAAGCGCCCTTCGATGTCCGAAGTGACAAAGCGCATTGAAGAGCTACGTGGTGCTAGATTGCGAGAGGCTCAAGACCAAATCCAACAGCCTGATCTGATCAATGATATAGATGATGTATCTTCTCGATGA 1986 0.4758 MLRHKLSILFAVFLILLPLAKPDLGSERVALVALRSAVRGRTLFWNVSELSPCEWAGVECEHDHVVELHLPGVALSGPIPTGIFGNLTHLRTLSLRFNALKGGLPVDLASCVNLRNLYLQQNLLSGEIPEFLFSLPDLVRLDLASNKFSGMIPLGFNNLTRLRTLFLENNQLSGSIPDLNLVKLVQLNVSNNLLNGSVPEKFQTFAEDSFLGNSLCGRPLKLCPGDGTGTGTGNGTSPAAEIENNEGKRKKKLSGGAIAGIVLGSAVCLMLILFVLIILCRKRSSQKTRSVDISSEKHPEVEIPGEKSVSNVENGGQSNGYSVAAAAVAAMSGNGSKAEANDGGMKKLTFFGNSPKVFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLRDVTISEREFKEKIEFVGAMDHENLVPLRAYYYSGDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIGYLHSQGTNVSHGNIKSSNILVTSSLDARVSDFGLAHLVGPSSTPNRVVGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHAILNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMSEVTKRIEELRGARLREAQDQIQQPDLINDIDDVSSR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1909 661 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Glsi01g1909 661 MobiDBLite consensus disorder prediction 289 312 - -
Glsi01g1909 661 PANTHER OS05G0588300 PROTEIN 9 640 - -
Glsi01g1909 661 Gene3D Ribonuclease Inhibitor 181 223 IPR032675 -
Glsi01g1909 661 FunFam pollen receptor-like kinase 1 334 439 - -
Glsi01g1909 661 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Glsi01g1909 661 SUPERFAMILY Protein kinase-like (PK-like) 369 632 IPR011009 -
Glsi01g1909 661 Gene3D Transferase(Phosphotransferase) domain 1 440 659 - -
Glsi01g1909 661 CDD STKc_IRAK 371 634 - -
Glsi01g1909 661 FunFam Probable inactive receptor kinase RLK902 24 180 - -
Glsi01g1909 661 SUPERFAMILY L domain-like 39 204 - -
Glsi01g1909 661 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Glsi01g1909 661 Pfam Protein kinase domain 368 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1909 661 Gene3D Phosphorylase Kinase; domain 1 331 439 - -
Glsi01g1909 661 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Glsi01g1909 661 ProSiteProfiles Protein kinase domain profile. 365 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1909 661 FunFam Probable inactive receptor kinase At1g48480 440 643 - -
Glsi01g1909 661 MobiDBLite consensus disorder prediction 227 248 - -
Glsi01g1909 661 MobiDBLite consensus disorder prediction 289 304 - -
Glsi01g1909 661 Pfam Leucine rich repeat 79 124 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1909 Glsi-ChrGlsi01 82553410 82556015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1909 23 650 Receptor kinase-like Gene Family AT1G48480 66.088 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi01g1909 Pkinase 1e-38 CL0016