Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1897 ATGGAATCTGAGAGGAGCAGTACTACTAGTGAGAACTACAAAGGAGGAGGAGAAGAAGACGAGGTCCTCAAGAGAGAAATCTCTAGCCATCCACTCTATGAACTGCTGGTTGAAGAACACATGAAGTGTTTGAAGGTGGGTGAGATTTCCAACTTGGAGAGAGTAGGGCAGAAGAAAGATAAGAAGCAAGGAACGAAGAAACCAAACAAGGGCATGTTTAGTGAGTCAGAGCTTGATCTCTTCATGATCATGACTGTGACAATTGCTCAAAAGGAAGCATATTGCATGGCACTAGGGAACCTGAAAGAAGCAATGGAGGAACCACAACTAAAGTCCATGGCTTTCATCAACAACATGCACTCACAACTGAGGGAGCTCACTGATGGGGCAAGCTTGCCTTCACCTCCTGAAACTGCAACCCCCTCCACTTCATCTTCTTACTGCAATATCCAAACAGATCCGAGACTTTAA 471 0.4501 MESERSSTTSENYKGGGEEDEVLKREISSHPLYELLVEEHMKCLKVGEISNLERVGQKKDKKQGTKKPNKGMFSESELDLFMIMTVTIAQKEAYCMALGNLKEAMEEPQLKSMAFINNMHSQLRELTDGASLPSPPETATPSTSSSYCNIQTDPRL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1897 156 MobiDBLite consensus disorder prediction 1 23 - -
Glsi01g1897 156 Pfam KNOX1 domain 23 47 IPR005540 GO:0003677|GO:0005634
Glsi01g1897 156 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 5 130 - -
Glsi01g1897 156 SMART KNOX1_2 21 61 IPR005540 GO:0003677|GO:0005634
Glsi01g1897 156 SMART KNOX2_2 68 128 IPR005541 GO:0003677|GO:0005634
Glsi01g1897 156 MobiDBLite consensus disorder prediction 127 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1897 Glsi-ChrGlsi01 82474277 82477093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1897 22 129 Homeobox Transcription Factor Family AT1G70510 32.143 2.76e-09 52.8