Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1886 ATGGATGGGGATAATGGCCTGAATATACGCAATTGGGGTTACTATGAACCCACAACGTCCTTTAAGAGCCATCTTGGGCTCCAGCTTATGTCTTCTATGCCCGAAAAATCTCTGCTTGGAGGACGCAATGCTGCAGTTTTACCTGGCACCAACGGGGCATTTCACCATAGGGACATTGGGATGCCACAAGCAACATACCCTATGGATTACATGAGGGAAGCTTGGATTAGTCAGAGAGAGAAGTATCTGAACATGATTCCTACAAATCCAAACTATGTTGTTATCCCTGAGACATCATCGGCCCATCATATGCAATTGATTCAACCACCTGACTTAGCCAAGGAAGAAAGACCGGTGGAAGAGGCACCTGTTGAGAAGACCAGCAGCACTAGTAAGAAAAGGCAGGGACCAAAGGTGCCGAAATCTCCCAAGGCGAAGAAGCCCAAGAGAGGGCCTCGTGTGGCAAAGGATGAAAATACTATTTCAGTTCCACGGGCAAGGACTGTAAAGAAAACTACTGAAATTGTAATTAATGGGATCGATATGGATATTTCCAGTATTCCTATTCCAGTTTGTTCATGCACTGGGACACCTCAGCAGTGTTACAGATGGGGCTCAGGTGGGTGGCAGTCTGCTTGTTGCACAACAGGCATGTCAGTGTATCCATTACCTATGAGTACCAAGCGTCGTGGTGCTAGGATAGCAGGAAGAAAAATGAGTATAGGAGCATTTAAGAAAGTCTTAGAGAAACTTGCAGCCGAGGGTTATAACTTCTCCATTCCAATTGATTTGAAGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGTACATGGGAATTCAATCTTGTGGTTGTTGGTCCTGATTGGGAACTAGCAAATTAG 894 0.4508 MDGDNGLNIRNWGYYEPTTSFKSHLGLQLMSSMPEKSLLGGRNAAVLPGTNGAFHHRDIGMPQATYPMDYMREAWISQREKYLNMIPTNPNYVVIPETSSAHHMQLIQPPDLAKEERPVEEAPVEKTSSTSKKRQGPKVPKSPKAKKPKRGPRVAKDENTISVPRARTVKKTTEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSIPIDLKTYWAKHGTNKFVTISTWEFNLVVVGPDWELAN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1886 297 PANTHER - 1 279 IPR010409 -
Glsi01g1886 297 SMART GAGA_bind_2 1 280 IPR010409 -
Glsi01g1886 297 MobiDBLite consensus disorder prediction 109 132 - -
Glsi01g1886 297 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Glsi01g1886 297 MobiDBLite consensus disorder prediction 109 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1886 Glsi-ChrGlsi01 82381334 82382423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1886 1 279 BBR or BPC Transcription factor family AT2G01930 52.203 5.80e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Glsi01g1886 GAGA_bind 2.8e-110 No_clan