Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1876 ATGATAAAGCCAGTAGAGCAATCAGGGAAAAGACCTGTACTGGGGGAAAAAAAAACAAAAACAAGTAGCGGCGACACACCAGCAGCAATCGCCCACTGCCACCAGGGTATAAAGAGACATAATGCGGCCATTTGGTTATGCCTAATACGAGTCGGGTGTATGCTTTCTCCTGGTTTTCAGTTAGGTTTGCGGGGCTTTAGAATGGCAGACACAAACTCAGTTGGAGTAATTTTGGACTTTTTAAGGAGGAATAGATTCACAAGAGCTGAGGCATCTTTGCGCAGTGAGCTAAATAATCGCCATGACTTGAACGGCTTCCTTCAGAAGCTTACCCTCGAAGAGAAGGCCTTACATAATACGTCAGAAAAGGATAAGGGAAAACCAGGTCTAGAAAATCAAGGGTTGGATTTTCATGATCACGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAGTGTGGGACTGGTATAAATGTGACTGAAAGCAAATGGAAGAGTACTCCTTCTATTGGAGAATTGAAAAAATCTAATGAAGTAGTTGGGGCAAGTGACAAAAACTTAACTTTCTCCAAGCTTTCAGAGGATAGTGTGCGTGATATATACTCATGGAAGTTCAACCCTAGCAATGGTCCTGTGGGGCCTTACCAAAATGATGGTGGTAGTAGTGCCAATAATACTTTGAAGGCCCCAGTTTCTCAGCAGTTTAAATACCAAACAAGTGAATCTCTTAATATGGTCAACAGCAATGCAAAATCTGGAGACAAAAGTACTGTGCCTGCTGATAAAAAGTCCTGGTGGCTTGGAAGTAGTAACAAAGCCTCTGTGGAACAAAGGTATGATGGTATGCAAATCAAAGAACCAAGGGAACTTGATTGCAAGCCTAAATTTAAAAATTCATCCTTTAAAGAGAACTTTGCAGACAATCCCTTGTCAATAACGGATGAGAATGAGAATTCATCTTCAGACTTGTGGAAAGATTGCTCTGTCAAGACTGTTTTTCCCTTCTCCACGGGGGGTATATCCACAAGCTATGATGGTGCAATTTATTCTGAAAAGAAAGAGGAAAAAAGAAGGGCAGAAAGAAGTGACATCAGGGCTGCAATGAAAGCGCAGGTGGATGAAGTAGGGAGAGCTATTTATGTAGGCATGTCACAAGGCAGTTCTGAACAGAAGACCATTGGCAGCTTAAATTTTCCCGTTGCACCTGAGAATCAGAAGGAAGAGTTACCTAGGCTTCCTCCTGTTAAACTAAAGTCAGAGGACAATTCCTTGGCTGTTAATTGGGTGGAAAAGTTTGAGCAGGATGGACCCGCTTCAAGACTTGAATGTGGTGACAGCACTTTACTTATAGGATCATATCTGGATGTGCCAGTTGGACTAGAAATTAACCCTGCAGGTATGAGGAGAGCTGTTGGGGGAAGTTGGCAATCTGTAAGTCAAGGGATTACAGAGGATACATCTGATCCTGTATCTGGATTTGCTACAGTTGGTGATGCGTTGAGTCAATCTGTTGACTATCCAAATGAATATTGGGACTCAGATGAATATGATGATGATGATGATGTCGGGTACATGAGGCAACCTATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTATCCGAGTGACAATGAAAAGGCAACTGGGCATAGAAATGTTCCGGATCCTCAGGACAGAGGTCCAGCCAAAGATGAAGATGATGATCAATCTTTTGCTGAAGAAGATTCTTATTTCTCTGGAGAGCAATATGTTCCATCAAAGAACATTGATCCAGTCACAACTTCAGATGATTCTATTGGTCTGACAGTAACTGAAATGTATGGAAGGACTAATAAGAATGAATTGATGGCTCAATATGATGCACAATTGATGGATGAAGAAGAACTGAAACTAATGCGTACAGAACCTGTCTGGCAGGTATTTGTCTCTGAGACTAATGAACTCGTCATGCTAAGAGATGGGAAGATTCTGAATGACAGGGGAAGGTCACAACTCGAGGAAATCTGCGTTGATGATGATCACCATGGTTCAGTTAGGTCAATTGGGGTGGGAATCAACAGTGATGCTGCAGATATTGGCAGTGAAGTGCAGGAAAGTTTGGTTGGTGGTTGTAGTGAAGTGGATTTAGAATATTTCTGTGATCATGATGCAGGACTTGGTAGTGCCAGTCACGCTCAGCATGATTTGGATATGAAATCTGTCCATAAACTGAACAAAAGTAAGAAGAAAAATGGCAAGAGTGATTCAAATAAGTATGTCATTGGGGGTGATAAAGGTGCATTGATGCAGATGAATGCTGATACTGCTGGAAGCTTCTCATTTCCCCTATCACTGAAAGATGGCCAGATAACTCAGGCTGGCTCCAGTAAGTCTATTTGGTCAAAGAACTGCAATGCTGATCAAAATGATGACCGTCTTAATGCATTTGTGGGATCTGATGACATTCTTGCTTCATGGAAGCAGAAAAGCAGTGATTCTTCCCCAATTAAAAGTTCTAGGGATGAGAGTAATACTAATGCTGTAAGATCCACTGACTCTTCGCCAATAGCAGTCTCAAATTATGGATATGCCGAAAGAGCTCATGTCAAACTAGAAGAGGATGAAAAGGTTGGCATTGCAGGGGAAGAAGATCTCGGGGCATCACTGGAGGACGAAGAGGCTGCTGCTGTTCAAGAGCAATTAAGGCAAATAAAGGCCCAGGAAGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCATAGGAAAAACAGAACCGGCTTTGAAGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCGTTATCATGTTACCGAGTATCTGGGATCTGCTGCATTCAGCAAAGCTATACAAGCTCATGACCTGCATACAGGCATGGATGTTTGTGTTAAAATAATAAAGAACAACAAGGACTTTTTTGACCAAAGTCTTGATGAGGTCAAGCTTCTCAAGTATGTCAATAAGCACGATCCAGCTGACAAGTATCACATTCTTCGACTGTATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGCGAACTACTTAAAGCCAATTTATATGAGTTTCATAAATTTAATAGAGAATCAGGGGGAGAAGTGTACTTCACAATGGCAAGATTGCAGTCAATTACAATTCAGTGTTTCGAAGCACTGCAGTTTTTGCACAGCCTTGGACTAATACATTGTGACCTGAAGCCAGAGAATATTTTGGTAAAAAGCTATAGTAGATGTGAGGTGAAGGTAATTGATCTTGGGAGTAGTTGTTATGAGACAGATCACCTTTGCTCCTATGTTCAGTCCAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCCGTATGACAAGAAGATTGATATCTGGTCACTCGGTTGCATTTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCTAAATGATTCTCCTGCAACATTACTTGCTCGGGTGATTGGCATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAAGGACGTGATACATACAAGTATTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAAACCAACAGGTTAGAATATCTGATTCCCAAAAGAACATCATTGAGGCATAGATTGCCAATGGGAGACGAAGGCTTCATCGACTTTGTTGCTCATCTGCTTGAGATAAACCCCAGTAAGCGGCCCTCTGCATCTGAGGTACTGAAGCACCCATGGTTATCACACCCTTATGAGCCCATATCATGTTGA 3759 0.4142 MIKPVEQSGKRPVLGEKKTKTSSGDTPAAIAHCHQGIKRHNAAIWLCLIRVGCMLSPGFQLGLRGFRMADTNSVGVILDFLRRNRFTRAEASLRSELNNRHDLNGFLQKLTLEEKALHNTSEKDKGKPGLENQGLDFHDHVEVSKELIVKEIECGTGINVTESKWKSTPSIGELKKSNEVVGASDKNLTFSKLSEDSVRDIYSWKFNPSNGPVGPYQNDGGSSANNTLKAPVSQQFKYQTSESLNMVNSNAKSGDKSTVPADKKSWWLGSSNKASVEQRYDGMQIKEPRELDCKPKFKNSSFKENFADNPLSITDENENSSSDLWKDCSVKTVFPFSTGGISTSYDGAIYSEKKEEKRRAERSDIRAAMKAQVDEVGRAIYVGMSQGSSEQKTIGSLNFPVAPENQKEELPRLPPVKLKSEDNSLAVNWVEKFEQDGPASRLECGDSTLLIGSYLDVPVGLEINPAGMRRAVGGSWQSVSQGITEDTSDPVSGFATVGDALSQSVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKATGHRNVPDPQDRGPAKDEDDDQSFAEEDSYFSGEQYVPSKNIDPVTTSDDSIGLTVTEMYGRTNKNELMAQYDAQLMDEEELKLMRTEPVWQVFVSETNELVMLRDGKILNDRGRSQLEEICVDDDHHGSVRSIGVGINSDAADIGSEVQESLVGGCSEVDLEYFCDHDAGLGSASHAQHDLDMKSVHKLNKSKKKNGKSDSNKYVIGGDKGALMQMNADTAGSFSFPLSLKDGQITQAGSSKSIWSKNCNADQNDDRLNAFVGSDDILASWKQKSSDSSPIKSSRDESNTNAVRSTDSSPIAVSNYGYAERAHVKLEEDEKVGIAGEEDLGASLEDEEAAAVQEQLRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEVKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMARLQSITIQCFEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCYETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFLNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKRTSLRHRLPMGDEGFIDFVAHLLEINPSKRPSASEVLKHPWLSHPYEPISC 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1876 1252 CDD PKc_DYRK_like 941 1243 - -
Glsi01g1876 1252 PANTHER DUAL SPECIFICITY PROTEIN KINASE 475 1244 - -
Glsi01g1876 1252 Gene3D Transferase(Phosphotransferase) domain 1 995 1243 - -
Glsi01g1876 1252 Gene3D Phosphorylase Kinase; domain 1 935 1022 - -
Glsi01g1876 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1067 1079 IPR008271 GO:0004672|GO:0006468
Glsi01g1876 1252 Pfam Protein kinase domain 941 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1876 1252 SUPERFAMILY Protein kinase-like (PK-like) 930 1248 IPR011009 -
Glsi01g1876 1252 SMART serkin_6 941 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1876 1252 Coils Coil 883 913 - -
Glsi01g1876 1252 FunFam Serine/threonine-protein kinase ppk15 1020 1244 - -
Glsi01g1876 1252 MobiDBLite consensus disorder prediction 1 27 - -
Glsi01g1876 1252 MobiDBLite consensus disorder prediction 546 569 - -
Glsi01g1876 1252 MobiDBLite consensus disorder prediction 823 849 - -
Glsi01g1876 1252 MobiDBLite consensus disorder prediction 546 594 - -
Glsi01g1876 1252 FunFam Putative serine/threonine-protein kinase dyrk2 935 1022 - -
Glsi01g1876 1252 ProSiteProfiles Protein kinase domain profile. 941 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1876 Glsi-ChrGlsi01 82282766 82296824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1876 940 1238 MAP Kinase Gene Family AT5G19010 29.467 2.40e-27 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Glsi01g1876 Pkinase 2.9e-50 CL0016