Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1857 ATGAGACCCATCTCATCAAATTCGCGGCACCCCCCTCGCCGAGCTAGCATTCTGAATGGCATCGAAGAATTCCCAGAAAGGATGAGGGGTTGCTGCAAGGTTATCTTCGGTGGTGCACTCCCTCCTACAGTTACTGCTTCATTCTCCAACAGAGAGATTGTTCAGAGCCAAAAGCCTTTTCTCAAATTGAAGAGCTTTCCTTCTGTCTCTCTCTGCCATCGAAAACGGTCGGTGCCCGCTTCACAGCTTCGCTCAGCGAAGAAGACGAACGGTGGCAAGTATGGCGGGACTGCTTTCGGATGTGGGTGTTCCACTTCTGCACAATGTGATGCTGCAGAAAATTCGGAGGATGATTTTGTGGTCGTGAATTTTTACCATTTTGTGTTTATTAAAGACCCAGAAGCAGAAGTCGCCAAACACCTTACTTTCTTGGAGGGTTTTGACATAAATGGTAGAGTCTATTTGAATGAACAAGGGATCAATGCGCAGTATAGTGGGCCATCAAAAGATGCTCTGGCATATGTTGAATGGTTAAGAGAGGACGACAGATTTTCTGATATCCTGGTTCAGATTTCTCCATCAGTGAATGGACATTCCTTCCCAAAATTGAAGTTGCGGTATAAGCCCTCACTAGTACAGTTTGAAGGTGGCATATCACATCTTCCTTTGCTTGATTCTTCAATGCGGGCAACACCATTAGAACCATCAGAATGGAGAAATAGATTGGAAGCAATCAATAGGGCAGGTCTTACATCAAAAGAATATCCTGCTACCAATTACGTTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCATGGGGCTCAGCGACCTAATGTGGACTGCTTTAGGAGCACCTCATTTGGTCTTTCTCAGGAAGAGGTCACTGCCTCAGATCCTTTATCAAATGTAGATGAAGAAAAAACAAATATATTGATGTATTGCACTGGAGGGATTCGTTGTGATGTATATTCTACAATACTAAGACAGAGGGGCTTCCAGAACTTGTATACCTTGAAGGGAGGTGTTTCTAACTATTTAATGAATGAAGGTCCAGCAGAATGGGTAGGAAATTTATTTGTGTTTGACTCTCGTCTGTCTCTGTCTCCTTCTTCCTACTATCCTGGAGCCACAACTGAAACAGACAGGACTCAAGACTCTGCAAATGATAAGTTTGCAAAATGCTACATATGTGGTTCTGAAGTCAGTGAACTGAGGCACAGGAACTGTGCAAATCTTGACTGCAATTTTCTTTTTCTATGCTGCAGAAAATGTGTGAAAGAGCTAAGGGGATGTTGTTGTTGGAGATGCACAACTGCTCCTAGACTTAGGCCTGTTTTAAAAGGAGAACAGAGATACAAAAAATGGCACATCTATCGTGATATAGATTTGCAAAGAAAGATCACAACTTCAGCCTGA 1431 0.4291 MRPISSNSRHPPRRASILNGIEEFPERMRGCCKVIFGGALPPTVTASFSNREIVQSQKPFLKLKSFPSVSLCHRKRSVPASQLRSAKKTNGGKYGGTAFGCGCSTSAQCDAAENSEDDFVVVNFYHFVFIKDPEAEVAKHLTFLEGFDINGRVYLNEQGINAQYSGPSKDALAYVEWLREDDRFSDILVQISPSVNGHSFPKLKLRYKPSLVQFEGGISHLPLLDSSMRATPLEPSEWRNRLEAINRAGLTSKEYPATNYVLLDVRNGYEWDIGHFHGAQRPNVDCFRSTSFGLSQEEVTASDPLSNVDEEKTNILMYCTGGIRCDVYSTILRQRGFQNLYTLKGGVSNYLMNEGPAEWVGNLFVFDSRLSLSPSSYYPGATTETDRTQDSANDKFAKCYICGSEVSELRHRNCANLDCNFLFLCCRKCVKELRGCCCWRCTTAPRLRPVLKGEQRYKKWHIYRDIDLQRKITTSA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1857 476 CDD RHOD_YceA 233 351 - -
Glsi01g1857 476 SMART rhod_4 234 356 IPR001763 -
Glsi01g1857 476 Pfam UPF0176 acylphosphatase like domain 120 209 IPR040503 -
Glsi01g1857 476 Pfam Rhodanase C-terminal 361 442 IPR022111 -
Glsi01g1857 476 Gene3D - 106 212 - -
Glsi01g1857 476 Pfam Rhodanese-like domain 259 351 IPR001763 -
Glsi01g1857 476 ProSiteProfiles Rhodanese domain profile. 256 359 IPR001763 -
Glsi01g1857 476 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 110 457 IPR020936 -
Glsi01g1857 476 Gene3D - 224 387 IPR036873 -
Glsi01g1857 476 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 257 370 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1857 Glsi-ChrGlsi01 82111182 82116230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1857 98 469 Sulfurtransferasese or Rhodanese AT1G17850 65.104 0.0 524