Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1839 ATGGGATTTCTTCTGAAACTTTTATTTATGATAGGACACCTGGGGTTGGAAGCTGAAGCTTGTAATCTGCATAAAGTTGGTCCAACAAAACTGTTTGTTTTTGGGGACTCATACGCAGACACCGGCAACATCAGGAAAGGCGTATCAAGTTCCTGGAAACAACCATATGGAATAACCTTTCCTGGCAAACCCGTCGGCCGATTCTCCGACGGCAGAGTCCTCACCGACTATATTGCCAAGTATTTGGGATTGAGGTCACCAGTCCCTTACAGATTAAGAAAATTGATGCCACAATATTTGAAATACGGGATGAACTTCGCCTTTGGTGGTACGGGAGTTTTCGATACCTCTTCTACAAACCCAAATATGACTACCCAAATCGATATCTTTCAAGGCCTCATCAAACACAAAGTCTACCCCACCGCTGACCTCTCCAATTCTGTGGCTCTCGTCTCCGTCGCCGGTAATGACTACACTTATTATACCGTCCAGGGTTACCCATCCTTTATTGCCTCAGTAATTGACCAGACGATCACCAATCTAGTTCGCCTCCAAGGCTTGGGAGTGAAGAAAATTGCAGTGAGTGGTCTGCAGCCTCTTGGGTGCCTTCCTGATGCCACAGCTTCATCCTCATTTCAACAGTGCAATAGAACCTCTAACACCTTGGTAGCTCTCCATAACAACCTCTTAAGCCAAGCTGTCACCCAACTGAACCAAAAGACCAAGGACAGTTCCACCTTTGTTTTTCTTGACCTTTATGAAAGTTTCATGTCAGTGCTGAACCACCCCTCCACTCATAGTATTCAGAACCAGTTCAAGCCTTGCTGCGTCGGGGTAAGCAGTGAGTATTACTGCGGAAGCGTGGACGAAAACAAGGTGAAGCAATACAGTGTCTGTGATGATCCTAAATCAGCTTTCTTTTGGGATTTGGTGCACCCCACGCAAGCTGGATGGCTTGCCGTTTATGACAAGTTACGCACCACCTCTGCTCTTCAACAACTTCACTACTAG 1011 0.4619 MGFLLKLLFMIGHLGLEAEACNLHKVGPTKLFVFGDSYADTGNIRKGVSSSWKQPYGITFPGKPVGRFSDGRVLTDYIAKYLGLRSPVPYRLRKLMPQYLKYGMNFAFGGTGVFDTSSTNPNMTTQIDIFQGLIKHKVYPTADLSNSVALVSVAGNDYTYYTVQGYPSFIASVIDQTITNLVRLQGLGVKKIAVSGLQPLGCLPDATASSSFQQCNRTSNTLVALHNNLLSQAVTQLNQKTKDSSTFVFLDLYESFMSVLNHPSTHSIQNQFKPCCVGVSSEYYCGSVDENKVKQYSVCDDPKSAFFWDLVHPTQAGWLAVYDKLRTTSALQQLHY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1839 336 Gene3D SGNH hydrolase 24 332 IPR036514 -
Glsi01g1839 336 SUPERFAMILY SGNH hydrolase 28 325 - -
Glsi01g1839 336 PANTHER OSJNBB0059K02.9 PROTEIN 17 333 - -
Glsi01g1839 336 Pfam GDSL-like Lipase/Acylhydrolase 31 322 IPR001087 GO:0016788
Glsi01g1839 336 CDD SGNH_plant_lipase_like 31 325 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1839 Glsi-ChrGlsi01 81927575 81929300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1839 29 321 Pollen Coat Proteome AT1G75930 29.193 2.73e-30 116