Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1821 ATGACAGGGCGAGCATCTTCCTCCTCTTCCTTCTGCTACCAATGGACCTACGATGTCTTCCTCAATTTTAGAGGTGAAGATACTCGTTATGGCTTTACTGGAAATCTTTGTAGTGCTCTTCGACGAAAGGGAATTCACACATTCATGGATGATGGGGAGCTCAGAAAAGGGGATGAAATTACACCATCACTCCTCAAAGCAATTGAAGAATCGAGGATGGCGATTATTGTATTCTCTAAGAATTATGCGTCCTCAACGTTTTGTCTTGATGAACTTGTCAAGATCCTTCGGTGTATTAAAGGAAATAGTCGATTGGTTTGGCCAATTTTTTATGATGTAGAGCCGTCAGAAGTGCGACATCAAAAAGGGAATTACGAAGAAGCATTGGCTATGCATCAAAAATATTTCAAGGCTAACGAGGAGAAGGTGCAAAATTGGAAGCTGGCACTACGTGAATCAGCTAATTTATCTGGCTCACATTTCAATCCTGGGCATGAATATGAGTATCAGTTCATTGAGAAGATTGTGAATGAGATCTCCAGTAAGATCAAAAGAAGTCCTTTACATATTGCTAAGTATCCAATTGGATTGGAGTCCCGGGTGATAAAAATAAACTCTCTTTTAGAAGTTGAGTCACATGACGAAGTCATCATGGTAGGAATTTGTGGAATTGGAGGAATGGGTAAATCGACGATCACACGAGCTGTATATAGCTCTATTGCTGATCAATTTGAAGGTTTGTGTTTTCTCCATGATATCAAAGAAAATTCAAGTAAACTAGGCCTAGAATCTATGCAAGAGAGAATGCTTTCAAAGACTTTAGGGATAAATATCAAGGTGGAAGATGTTAATGAAGGAATTCCAATAATAAAAAGGAGACTCAATCAAAAGAAAATTCTTTTGATTCTTGATAATGTTGACAAACCAGAGCAATTAGAGAACTTAGCAGGTAATTGCGACTGGTTTGGTTCTGGTAGTAGGATCATCATAACAACAAGAGATAAACATTTACTTGCAAGACATGGGGTTGAAAGATTATATGAAGTGAAAGAATTGAATAATGAAGAATCTCTTCAATTGTTAAGTTGGAATGCCTTTAAAAAGATCCAAGTTGATCCAAGTTACATGAAGGTTTTGAATTGTGTAGTAAAATATGCCAAAGGCCTTCCACTAGCCCTCGAAGTAATAGGCTCTCACTTGTTTGGGAAGAGTATAGAAGATTGGAAATCTTCCATAGATATATATAGAAGAATTCCAAATGAAGAGGTTCAAAAAATACTAAAAGTAAGCTATGATGGTTTAGGGAAAGTCGAGCAAGAAATTTTTCTTGATATTGCTTCTTTCTTCAGAGGGAAGGATATGAAATATGTCAAAGATATGGTACAACATGCTCGTGGTTTCGATCCAAGTTATGGTATTGGAGTGTTGATGGACAAATGTCTCATAAATTATTACGATGGTTATGTTGAAATGCATGACTTGATACGAGATATGGGGAAAGAAATTGTTCGTCAAGAATCGCCAAATGAGCCAGGAAAGCGCAGTAGATTATGGAATCATGAAGATATTGTTCATGTCTTAGAAAACAGTACAGGTACGAATAAAATTATTGTCATAATTCAGGAGTATCTTTCTGAAGTTATAAAAGTAGATTGGGATGGAAAGGCTTTCAAGAAGATGCAAAAGATAGCTACTAATACTTATGTAGTTCTATCTTCATCTGACTCAAAAGAAAAGGATACTAACAAGATTGAGTGGCTCGAATACTATACTCGTTGGGAAGAACCAGAGTATGCTAGTGACACTGTTAGTAGTAGCCAAGGATACAATATTAATGGCGATGAGTGGCGCTCCGGGGATCTACTCTTCGATTGGGAAGCACCCTTGGCCTTGGATGATCATAATGTTAATAGGGCTCCATTTTCTATGTTATTTGGGTCTACTAGTGACCAAGTTCTATCTCCATCTGACTCAAAAGAAAAGGATACTAACAAGATTGAGTGGCCCGAATACTATACTTGTTGGGAAGAACCAGAGTATGCTAGTGGCACTGTTAGTAGTGGCCAAGGATACAATATTAATGGCGATGAGTGGCACTCCTGGGATCTACGCTTGGATTGGGAAGAACCCTTGGCCTTGGATGATCATAATGTTAATAGGGCTCCATTTTCTATGTTATTTGGGTCTACTAGTGATCAAGTTCTATCTCCATCTGACTCAAAAGAAAAGGATACTAACAAGATTGAGTGGCCCGAATACTATACTCGTTGGGAAGAACCAGAGAATCCTAGTGACACTTGGTAG 2304 0.3806 MTGRASSSSSFCYQWTYDVFLNFRGEDTRYGFTGNLCSALRRKGIHTFMDDGELRKGDEITPSLLKAIEESRMAIIVFSKNYASSTFCLDELVKILRCIKGNSRLVWPIFYDVEPSEVRHQKGNYEEALAMHQKYFKANEEKVQNWKLALRESANLSGSHFNPGHEYEYQFIEKIVNEISSKIKRSPLHIAKYPIGLESRVIKINSLLEVESHDEVIMVGICGIGGMGKSTITRAVYSSIADQFEGLCFLHDIKENSSKLGLESMQERMLSKTLGINIKVEDVNEGIPIIKRRLNQKKILLILDNVDKPEQLENLAGNCDWFGSGSRIIITTRDKHLLARHGVERLYEVKELNNEESLQLLSWNAFKKIQVDPSYMKVLNCVVKYAKGLPLALEVIGSHLFGKSIEDWKSSIDIYRRIPNEEVQKILKVSYDGLGKVEQEIFLDIASFFRGKDMKYVKDMVQHARGFDPSYGIGVLMDKCLINYYDGYVEMHDLIRDMGKEIVRQESPNEPGKRSRLWNHEDIVHVLENSTGTNKIIVIIQEYLSEVIKVDWDGKAFKKMQKIATNTYVVLSSSDSKEKDTNKIEWLEYYTRWEEPEYASDTVSSSQGYNINGDEWRSGDLLFDWEAPLALDDHNVNRAPFSMLFGSTSDQVLSPSDSKEKDTNKIEWPEYYTCWEEPEYASGTVSSGQGYNINGDEWHSWDLRLDWEEPLALDDHNVNRAPFSMLFGSTSDQVLSPSDSKEKDTNKIEWPEYYTRWEEPENPSDTW 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1821 767 Gene3D - 351 435 IPR042197 -
Glsi01g1821 767 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 590 IPR044974 GO:0006952
Glsi01g1821 767 MobiDBLite consensus disorder prediction 729 767 - -
Glsi01g1821 767 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Glsi01g1821 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 445 IPR027417 -
Glsi01g1821 767 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Glsi01g1821 767 SMART till_3 16 156 IPR000157 GO:0007165
Glsi01g1821 767 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
Glsi01g1821 767 MobiDBLite consensus disorder prediction 737 767 - -
Glsi01g1821 767 Pfam NB-ARC domain 205 432 IPR002182 GO:0043531
Glsi01g1821 767 PRINTS Disease resistance protein signature 293 307 - -
Glsi01g1821 767 PRINTS Disease resistance protein signature 386 400 - -
Glsi01g1821 767 PRINTS Disease resistance protein signature 218 233 - -
Glsi01g1821 767 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Glsi01g1821 767 Gene3D - 181 344 IPR027417 -
Glsi01g1821 767 Pfam TIR domain 17 186 IPR000157 GO:0007165
Glsi01g1821 767 Gene3D - 13 180 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1821 Glsi-ChrGlsi01 81638044 81646395 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1821 17 560 WRKY Transcription Factor Family AT4G12020 31.777 1.67e-58 214