Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1819 ATGGTAAACCCGAAAACTGAACCCAGACATCAAGAGAATCAAGAGGAAGATTTCAACGCACCATATGTTGAGGAGGCAAAGAGGGAGACATACATTACTGCCAAAAGGATAAATGAAAGGTTTGGTTTGCCAAATTATGAACCTGTGATAATCATAGATCGTCCTGTTCCTTTATATGAGAAGACCACCTATTATGCTTTGGCAGAGTGTTGCATTGTGAATGCAGTGAGGGATGGTATGAATTTAGTTCCATACAAGTACATTGTCTGTAGGCAGGGGAGTACAAAAATGGATGAAGCCTTGGGCGTTTCTCTGGAGTCTCCTCATACAAGTGCTCTTGTTGTTTCTGAGTTCATAGGTTGCTCTCCATCACTAGGTGGGGCACTGAGGGTGAATCCGTGGAACATTGATTCTGTAGCTCATGCAATAAATTTGGCCATAACAATGCCTGGCGTAGAGAAACAGTTGCGCCATGAGAAATGCTTATTTTAA 492 0.4228 MVNPKTEPRHQENQEEDFNAPYVEEAKRETYITAKRINERFGLPNYEPVIIIDRPVPLYEKTTYYALAECCIVNAVRDGMNLVPYKYIVCRQGSTKMDEALGVSLESPHTSALVVSEFIGCSPSLGGALRVNPWNIDSVAHAINLAITMPGVEKQLRHEKCLF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1819 163 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 23 161 IPR001830 GO:0003824|GO:0005992
Glsi01g1819 163 FunFam Alpha,alpha-trehalose-phosphate synthase 11 162 - -
Glsi01g1819 163 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 21 161 - -
Glsi01g1819 163 MobiDBLite consensus disorder prediction 1 20 - -
Glsi01g1819 163 Gene3D Glycogen Phosphorylase B; 6 162 - -
Glsi01g1819 163 Pfam Glycosyltransferase family 20 20 161 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1819 Glsi-ChrGlsi01 81573777 81574432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1819 23 160 Trehalose Biosynthesis Gene Families AT1G23870 72.464 4.67e-68 219