Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1805 ATGTCGTCATCAACCCCTCAAGTCATCACCTGCAAAGCTGCGGTGGCATGGGGAGCTGGAAAGGCATTGGTAATGGAGGAAGTGGAAGTGAGTCCTCCCCAACCCATGGAGATCAGGATTAAAGTTGTCTGCACCTCTCTCTGTCGCAGCGATCTTGCTGCTTGGGAATCCCAAACTATATTTCCTCGTATATTTGGCCATGAAGCATCAGGGATTGTTGAGAGTGTGGGGCAGGGAGTGACCGAATTCAAGGAGGGAGACCATGTGCTAACGGTCTTCATTGGAGAATGCATGACATGCAGGCTTTGCAAATCTGGAAAAACTAACATATGTCAAGTTTTGGGATTGGAAAGAAAAGGTTTAATGCATAGTGATCAGAAGACACGTTTCTCAGTAAAAGGGAAACCTATTTATCATTATTGTGCTGTTTCAAGTTTCAGTGAATATACAGTAGTCCATTCTGGATGTGCGGTCAAAGTCAGTCCAAATGTTCCTCTTGAGAAAATATGCCTTTTGAGCTGTGGAGTTGCTGCAGGTCTGGGTGCGGCATGGAACATTGCTGATGTATCAGAAGGATCAACAGTGGTGATATTTGGTCTTGGAACCGTTGGCCTTTCTGTTGCACAAGGTGCCAAACTTAGGGGTGCATCTCGAATAATTGGTGTGGACAACAATCCTCAGAAGTGTGAAAAAGCTAAAGCTTTTGGAATTACGGAAGTTGTCAACCCAAATACCTGCAAAGAACCTATTGCTCAGGTTATTAAGCGCATCACTGATGGAGGAGCAGATTTCTCTTTTGAATGTATAGGCGACACTGATATGATAACCACAGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTTACCCTTGGTGTGCCAAAAGTGAAGCCTGAGATGTCGGCTCATTATGGACTATTATTAATGGGAAGAACTTTGAAGGGAACTTTATATGGGGGATGGAAACCTAAATCTGATCTACCTTTATTAGTAGAGAAGTATGTGAATAAGGAAATCCAGATTGATGACTACATAACACATGATTTGCCATTTGATGACATCAACGAAGCTTTCAATCTCATGAAGGAAGGAAAGTGTCTGCGTTGTGTTATCCACATGGCCAGATGA 1131 0.435 MSSSTPQVITCKAAVAWGAGKALVMEEVEVSPPQPMEIRIKVVCTSLCRSDLAAWESQTIFPRIFGHEASGIVESVGQGVTEFKEGDHVLTVFIGECMTCRLCKSGKTNICQVLGLERKGLMHSDQKTRFSVKGKPIYHYCAVSSFSEYTVVHSGCAVKVSPNVPLEKICLLSCGVAAGLGAAWNIADVSEGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPQKCEKAKAFGITEVVNPNTCKEPIAQVIKRITDGGADFSFECIGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLLLMGRTLKGTLYGGWKPKSDLPLLVEKYVNKEIQIDDYITHDLPFDDINEAFNLMKEGKCLRCVIHMAR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1805 376 Pfam Alcohol dehydrogenase GroES-like domain 36 159 IPR013154 -
Glsi01g1805 376 FunFam Alcohol dehydrogenase 6 14 194 - -
Glsi01g1805 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Glsi01g1805 376 Pfam Zinc-binding dehydrogenase 203 323 IPR013149 -
Glsi01g1805 376 PANTHER ALCOHOL DEHYDROGENASE 7 372 - -
Glsi01g1805 376 SUPERFAMILY GroES-like 5 184 IPR011032 -
Glsi01g1805 376 Gene3D - 14 369 - -
Glsi01g1805 376 SUPERFAMILY GroES-like 325 373 IPR011032 -
Glsi01g1805 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 317 - -
Glsi01g1805 376 CDD alcohol_DH_plants 9 373 - -
Glsi01g1805 376 Gene3D - 179 317 - -
Glsi01g1805 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 338 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1805 Glsi-ChrGlsi01 81287520 81291633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1805 37 174 Monolignol Biosynthesis Gene Families AT4G37990 26.056 4.14e-10 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1805 01 81287520 81291633 Glsi01g1805 01 81287520 81291633 ECH