Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1791 ATGAGAAACTCTGAAGCAGCGAATCATGAGGCTATGGAGATAGAGGCAAGCAAACCAGGAGGGAATGGGACAGCTGCTTTGCCAGGGTTGAGCCCCTTGAGTGAGACCCTTTGGAGGGAGAAGACTAACACAGATTTCATTGGAGATGTCTCGGCTAGGCTAACTTGGAAGGATCTGACTGTGATGGTAACTGTCAGTAATGGAGAAACCCAGAACGTTCTGGAAGGGCTAACTGGGTATGCTGAGCCTGGAACCTTCACTGCTCTCATGGGACCTTCTGGTTCAGGAAAATCCACTCTGCTTGATGCTCTGTCTAGTCGTCTAGCAGCAAATGCCTTCCTCTCAGGCACCATCCTCCTCAATGGTCGCAAAGCCAAACTCTCTTTTGGCACTGCGGCCTATGTGACACAAGATGACAACTTGATTGGCACCTTAACGGTACGAGAAACAATCTCGTATTCTGCTAGGTTGCGTCTGCCTGATAAGATGCCTCAGTCCGATAAGCAAGCTCTGGTAGAAAGCACCATCATAGCAATGGGTCTTCAGGATTGTGCTGATACAGTGATTGGAAACTGGCATTTGCGTGGGATCAGTGGAGGAGAAAAGAGACGAGTTAGCATAGCTTTGGAAATCTTGATGAGGCCTAGATTACTTTTTCTCGATGAGCCCACCAGTGGACTTGACAGTGCTTCGGCTTTCTTTGTGACTCAGACACTACGTGCCCTTGCAAGGGATGGGCGAACTGTGATAGCTTCTATCCATCAACCTAGCAGTGAAGTATTTGAACTATTTGACCAATTGTACCTGCTTTCTGGGGGCAAAACTGTTTATTTTGGCCAAGCTTCGGAAGCATACGAGTTCTTTGCACAAGCTGGCTTCCCATGCCCTGCTTTGAGGAATCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGATAAAGTCAAGGCCACTCTTAAAGGGTCCATGAAACTCAGGTTTGAGGCAAGTGATGATCCTCTGGACAAGATCACTACGGCTGAAGCTATCAGAACTCTTATTGATTTCTACCGCTCGTCTCAGTACTCGTACACTGCAATACAAAAAGTGGATGAAATATCCAAAGTTAAAGGAACCGTGCTCGATGCCGGAGGAAGTCAGGCTAGTTTCTTCATGCAGGCTTTTACCTTAACCAAGCGCTCATTCGTCAACATGTCAAGGGATTTTGGGTACTACTGGCTTAGGCTTGTTATCTACATTGTAGTCACACTCTGCATTGGAACCATCTATTTGAACGTGGGAACAGGCTACAATTCTATTCTGGCAAGAGGTTCATGTGCATCTTTTGTCTTCGGTTTTGTCACTTTCATGTCAATTGGTGGATTCCCTTCGTTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGACTTAATGGTCACTACGGTGTGACATCATTTGTGATCGGCAACACATTATCAGCAATGCCATTTCTGATCTTTATCACCTTTCTCTCGGGAACCCTTTGTTACTTCATGGTTCGCCTACATCCTGGCTTCTGGCATTATCTGTTCTTTGTGTTGTGCCTTTACGCCAGTGTCACTGTGGTTGAAAGCTTAATGATGGCCATTGCCAGTATCGTCCCCAACTTCCTCATGGGTATCATAATAGGAGCTGGGATTCAGGGCATATTCATGTTAGTCTCTGGCTACTTCAGGCTCCCGCATGATATCCCCAAGCCATTCTGGCGTTACCCAATGTCATATATCAGTTTCCACTTCTGGGCATTACAGGGTCAATACCAGAATGATCTGAGAGGCTTGATTTTCGACAACCAGACACCGGATCTTCCCAAGATACCCGGCGAATACATCCTTGAAAATGTCTTCCAGATTGACGTGAACCGATCGAAGTGGATAGATTTGATAGTAATCTTCAGCATGATCGTGATATACCGTATCCTCTTCTTCGTCATGATCAAAATTAGTGAGGATGTAACCCCATGGGTTAGAGGTTACATAGCTAGGAGAAGAATGCAGCAGAAGAGTGGAGCCCAGAATACTACTATTGCTCCAGACGTTCTTACTCAATCCCCATCTCTCAGAACCTATATTTCCAGCCAAACAAGTGGCGCTGCTTCTCGCAAAAGATAA 2133 0.458 MRNSEAANHEAMEIEASKPGGNGTAALPGLSPLSETLWREKTNTDFIGDVSARLTWKDLTVMVTVSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPQSDKQALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEASDDPLDKITTAEAIRTLIDFYRSSQYSYTAIQKVDEISKVKGTVLDAGGSQASFFMQAFTLTKRSFVNMSRDFGYYWLRLVIYIVVTLCIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTSFVIGNTLSAMPFLIFITFLSGTLCYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLIVIFSMIVIYRILFFVMIKISEDVTPWVRGYIARRRMQQKSGAQNTTIAPDVLTQSPSLRTYISSQTSGAASRKR 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1791 710 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 43 675 - -
Glsi01g1791 710 Pfam ABC transporter 76 225 IPR003439 GO:0005524
Glsi01g1791 710 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524|GO:0016887
Glsi01g1791 710 CDD ABCG_EPDR 51 279 - -
Glsi01g1791 710 Gene3D - 49 292 IPR027417 -
Glsi01g1791 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 291 IPR027417 -
Glsi01g1791 710 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 297 IPR003439 GO:0005524
Glsi01g1791 710 Pfam ABC-2 type transporter 387 593 IPR013525 GO:0016020|GO:0140359
Glsi01g1791 710 MobiDBLite consensus disorder prediction 1 28 - -
Glsi01g1791 710 SMART AAA_5 83 254 IPR003593 GO:0016887
Glsi01g1791 710 FunFam ABC transporter G family member 11 48 291 - -
Glsi01g1791 710 Pfam ABC-2 type transporter 254 310 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1791 Glsi-ChrGlsi01 81039289 81043969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1791 84 285 Calmodulin-binding Proteins AT2G36910 32.227 1.19e-11 66.6