Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1778 ATGGGTTTGCTGAAGACCGCGATAGTGGTGAAGGTGGCTGTGATGCTTTTCCTTCTGGGGTTCACTGCAAAAGCTGATGCTCGCTTCGATCCAATCTCGTTGCTGAGTGAGGAGATGCTGGCTAGTGAGCTCAGGTCGACGGTTGCGTGCTGTGATGTGGATATATGCACCAGGTCAATACCACCTCAATGCAGTTCTAAAATTCCTTCAGAGTTCTTCAATCACTTTGATAAGCTTCAAAAATTTGACGCCTCTGCCAATGAATTTCCGGGAAACATGCCATTTCCTCTGTTTTCTCTGTCTTCCACTCAGAACTTAAATTTGGCTGAAAACCAATTAAGTGGTGCCATCTCAGTGAACCTAGCCTGCAGTACTTCTCCGACATTTATTAAAGTTCATGGAAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGGGGAAAGAGGAATTAACCTGAGTAGAGGTCAAAAGCAGCGAGTTCAACTTGCTCGTGCTCTTTATCAGAATGCTGATGTATATCTCTTGGACGATCCATTCAGTGCTGTTGATGTACATACTGCCACAAATTTGTTCAACGTAAAGGCAACTTCCTTTTTTCCACATACTGCATAG 618 0.4385 MGLLKTAIVVKVAVMLFLLGFTAKADARFDPISLLSEEMLASELRSTVACCDVDICTRSIPPQCSSKIPSEFFNHFDKLQKFDASANEFPGNMPFPLFSLSSTQNLNLAENQLSGAISVNLACSTSPTFIKVHGKFAYVSQTAWIQTGERGINLSRGQKQRVQLARALYQNADVYLLDDPFSAVDVHTATNLFNVKATSFFPHTA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1778 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 195 IPR027417 -
Glsi01g1778 205 SUPERFAMILY L domain-like 67 127 - -
Glsi01g1778 205 Pfam ABC transporter 149 181 IPR003439 GO:0005524
Glsi01g1778 205 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 147 194 - -
Glsi01g1778 205 Gene3D - 145 204 IPR027417 -
Glsi01g1778 205 Gene3D Ribonuclease Inhibitor 36 129 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1778 Glsi-ChrGlsi01 80734024 80739631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1778 146 201 Calmodulin-binding Proteins AT2G36910 41.935 4.33e-08 50.8