Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1758 ATGCGGATTCTCATTCGAACCATTGAGATAGTAAAGTTCATAACTTTGATCCACCAGGGTAGCCCAAAAAAAGATCTGGGTCGAATGGAGCCAACAATTCCCACCAACTGTTTCGTTGACCTATCCGCCGTGCCCAGTCGTCCACGTCGCTCCAGATCTTCGAGTTGGTTACTTGGGCCAAATATTTCTGTCATATCAATCATGGCAACTAGAATTATGTTTGAGAATTCTTGTGAAGTTGGAGTTTTTTCAAAACTTACCAATGCCTATTGTTTGGTTGCAATTGGAGGTTCTGAAAATTTTTACAGTGCATTTGAGGCTGAGTTAGCAGATGTTATCCCTGTGGTGAAGACTTCCATTGGTGGCACTCGTATTATTGGTCGTCTTTGTGCTGGAAACAAGAAAGGGCTTCTCTTGCCCCATACCACCACAGATCAAGAACTTCAACATTTAAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGCATAGATGAAAGGTTATCTGCTCTGGGAAATTGTATAGCATGCAATGACCATGTGGCTCTCACGCACACTGATCTTGATAGGGAAACTGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTTAGGCAGACCATTGCTGGTAATATTCTTGTGGGCAGTTACTGTGCTTTCTCCAATAGAGGCGGTTTGGTCCACCCTCATACCTCTATTGAAGACCTGGACGAACTTTCCACACTTCTTCAGGTTCCTTTGGTGGCCGGGACAGTGAATCGCGGGAGTGAAGTAATAGCTGCTGGCATGACAGTAAATGATTGGACAGCTTTCTGTGGTTCAGACACCACAGCAACAGAACTCTCTGTCGTTGAGAGCGTTTTCAAGCTGAGGGAGGCCCAACCTAGTGCCATTGTGGATGAAATGAGGAAATCGCTAATTGATACCTATGTCTGA 939 0.4441 MRILIRTIEIVKFITLIHQGSPKKDLGRMEPTIPTNCFVDLSAVPSRPRRSRSSSWLLGPNISVISIMATRIMFENSCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELADVIPVVKTSIGGTRIIGRLCAGNKKGLLLPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVVESVFKLREAQPSAIVDEMRKSLIDTYV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1758 312 Gene3D - 68 292 - -
Glsi01g1758 312 CDD IF6 69 290 IPR002769 GO:0042256|GO:0043022
Glsi01g1758 312 SMART eIF6neu2 70 271 IPR002769 GO:0042256|GO:0043022
Glsi01g1758 312 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 68 311 IPR002769 GO:0042256|GO:0043022
Glsi01g1758 312 Pfam eIF-6 family 71 270 IPR002769 GO:0042256|GO:0043022
Glsi01g1758 312 SUPERFAMILY Pentein 68 291 - -
Glsi01g1758 312 Hamap Translation initiation factor 6 [eif6]. 57 312 IPR002769 GO:0042256|GO:0043022
Glsi01g1758 312 FunFam Eukaryotic translation initiation factor 6 68 292 - -
Glsi01g1758 312 NCBIfam translation initiation factor IF-6 71 291 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1758 Glsi-ChrGlsi01 80051192 80065968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1758 68 312 Eukaryotic Initiation Factors Gene Family AT3G55620 91.429 1.94e-172 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1758 01 80051192 80065968 Glsi12g1349 12 30856910 30861651 CCT