Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1747 ATGGAGGATTCTAGCAACTTTCATATTGATAAAATGCCAAGCCCTTCTTTTTCAGCCTTGGAGGAGCTTAGGGAAGAGAAAAAGATAATAATCAGGTACAAGGAATGCCTCAAGAACCATGCAGCTGCAATAGGTGGCAATGCAACTGATGGCTGTGGCGAGTTCATGGGTTCTGGAGAAGAAGGCACGCTTGAGGCTTTCAAGTGCTCAGCTTGTAATTGCCACAGAAACTTCCACAGAAAAGAGATAGAATATTATTATTCTAACTCCCATTATTGCCCTAATTTTCAATATTATGATCTTACTCAGATAAAGCCCATTAGTATTTTCGACCATTTATCTCCCAACAAAACTAATGGGTCAAATCTTACTGATCATCGTGATGAGGAAGATGTGGAAAAGCCAGATGAGAAGGTGATGCGGAAGAGGTTCAGGACTAAGTTCAGTCCAGAACAGAAGGAGAAGATGCTGAGGTTTTCTGAAAAGGCAGGTTGGAGGATGCAGAAGCTAGAGGAATCTGAAGTGCAACAGTTTTGCCAAGAGATTGGAATCAAGAGAAGAGTCCTTAAGTTTTTGGTTGACAATGATATGATTAATCCTAAGGCCATGAACTTTTGA 618 0.4078 MEDSSNFHIDKMPSPSFSALEELREEKKIIIRYKECLKNHAAAIGGNATDGCGEFMGSGEEGTLEAFKCSACNCHRNFHRKEIEYYYSNSHYCPNFQYYDLTQIKPISIFDHLSPNKTNGSNLTDHRDEEDVEKPDEKVMRKRFRTKFSPEQKEKMLRFSEKAGWRMQKLEESEVQQFCQEIGIKRRVLKFLVDNDMINPKAMNF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1747 205 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 22 196 - -
Glsi01g1747 205 MobiDBLite consensus disorder prediction 118 137 - -
Glsi01g1747 205 MobiDBLite consensus disorder prediction 122 137 - -
Glsi01g1747 205 SUPERFAMILY Homeodomain-like 138 196 IPR009057 -
Glsi01g1747 205 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 32 83 IPR006456 -
Glsi01g1747 205 Gene3D - 126 199 - -
Glsi01g1747 205 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 33 82 IPR006456 -
Glsi01g1747 205 Pfam ZF-HD protein dimerisation region 31 83 IPR006456 -
Glsi01g1747 205 NCBIfam homeobox domain, ZF-HD class 141 196 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1747 Glsi-ChrGlsi01 79955375 79957414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1747 27 198 ZF-HD Transcription Factor Family AT1G14440 48.454 2.66e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Glsi01g1747 ZF-HD_dimer 4.7e-28 No_clan