Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1715 ATGCTTCATCGCCTCCAATCTTTTTCTTCGCTATTCTTCCTTAGCCTTGCCTCCAGAGTCCTTAGACTTTCAACTATCTTTGACCTAGAAACCATTGATATCCTTCAGGGATCAGAAGCTAAGGTTGCTAATGCCAAGAATCCAAACGGAACTTCATCAAGGCAGAGCCCAATGAGCGAGCAGCAGAAGAAAACCTGCGCCGATTGCTGTACAAGCAAGACCCCTCTCTGGAGGGATGGTCCAGCTAGGCCTAAGATTGGTTCAGGTTCCGATGTGGAGGAAGATGAGGATGAGACATTGGAGATCAATGACACCATATTCCACACAGGTTTGCGGGCAGCGAAGAATGACAAGATTTTTATGAGTAAGCTAGTGATCTTGGTTACGATTCAGAGTTTTTTTCGTACAACATGGTGTAACCCAAAGAGCTCTAGGATCATAAAAGTCAAAGAGAAAAATTTTCAAATGTTATTGGATGATGTTCTAAAGATGCACAAAGTTGTGAGAAAGAGCCCATGGAATTATAAGAATAAACTGCTGGTGATTAAACCCTGGCAAAAGGGTGTGGATCCATCTGATGTCAATTTTTCAAAGGTAGTTTTTTGA 606 0.4224 MLHRLQSFSSLFFLSLASRVLRLSTIFDLETIDILQGSEAKVANAKNPNGTSSRQSPMSEQQKKTCADCCTSKTPLWRDGPARPKIGSGSDVEEDEDETLEINDTIFHTGLRAAKNDKIFMSKLVILVTIQSFFRTTWCNPKSSRIIKVKEKNFQMLLDDVLKMHKVVRKSPWNYKNKLLVIKPWQKGVDPSDVNFSKVVF 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1715 201 Gene3D - 58 141 IPR013088 GO:0006355|GO:0008270
Glsi01g1715 201 MobiDBLite consensus disorder prediction 43 63 - -
Glsi01g1715 201 Pfam Domain of unknown function (DUF4283) 128 198 IPR025558 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1715 Glsi-ChrGlsi01 78875748 78879500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1715 62 85 C2C2-Gata Transcription Factor Family AT5G49300 79.167 9.49e-08 47.8