LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi01g1697	ATGAATCCGACGTGGCATATCCACATCCACCAAACTATGCATATAGTATCTCCCTCTTCTCCCCATTTCGTTCTCCATCAACTGGCACCACCTTCTCCTGAGTTTCTAAGGCTTCCAAGCATGGCTTCCCTGGCCACATCCACCGCCGCCACCTCCCTTGGCATGTCAGAGATGCTCGGAAACCCTGTAAACTTCAGTGGGGCCACAAAGCCAGCACCATCACCATCTAGCCCTGCCACCTTCAAGACCGTCGCTCTTTTCTCCAGAAAGAAACCAGCACCAACACCACCTCCGAAGAAAAAGGCTGCCGCCGTCTCCCCGGCCAACGAGGAACTTGCCAAGTGGTATGGTCCTGACAGAAGAATCTTCTTGCCGGACGGTCTCTTGGACCGATCAGAGATCCCGGAGTACTTGACCGGAGAAGTTCCTGGAGACTATGGTTATGACCCATTTGGTCTTAGCAAGAGGCCAGAGGACTTTGCCAAATATCAGGCATATGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATTTGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACAGGAGCTCTGCTTCTTGATGGGAACACCTTGAACTACTTTGGAAAACCCATCCCCATCAATCTTATTGTTGCTGTAGTTGCTGAGATTGTTCTTGTGGGTGGTGCAGAGTACTACAGAATTATTAATGGCCTGGATTTGGAAGATAAGCTTCACCCAGGTGGTCCATTTGACCCATTGGGGCTGGCAAATGATCCAGACCAGGCTGCACTGCTAAAGGTGAAGGAGATCAAGAATGGTAGGCTTGCTATGTTTGCAATGCTTGGTTTCTACTTCCAAGCTTATGTGACAGGAGAAGGTCCTGTCGAGAACCTAGCAAAACATCTGAGTGACCCTTTTGGTAACAACTTGCTCACTGTCATTGCTGGTTCTGCTGAGAGGGCTCCAACTCTCTGA	1002	0.498	MNPTWHIHIHQTMHIVSPSSPHFVLHQLAPPSPEFLRLPSMASLATSTAATSLGMSEMLGNPVNFSGATKPAPSPSSPATFKTVALFSRKKPAPTPPPKKKAAAVSPANEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKRPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKPIPINLIVAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi01g1697	333	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	75	322	IPR001344	GO:0009765\|GO:0016020
	Glsi01g1697	333	Pfam	Chlorophyll A-B binding protein	135	296	IPR022796	-
	Glsi01g1697	333	SUPERFAMILY	Chlorophyll a-b binding protein	115	324	-	-
	Glsi01g1697	333	FunFam	Chlorophyll a-b binding protein, chloroplastic	122	333	-	-
	Glsi01g1697	333	Gene3D	Chlorophyll a/b binding protein domain	122	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi01g1697	Glsi-ChrGlsi01	78084752	78087596	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi01g1697	52	333	Chloroplast and Mitochondria Gene Families	AT4G10340	81.625	3.29e-153	429

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi01g1697	01	78084752	78087596	Glsi01g1697	01	78084752	78087596	ECH