Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1695 ATGGGATTTTCAGCACTTTCTCTTCTCTTCTCTTTCCTGGCTTTTCTCTTAATACCAACATGGGTCTGTGGGAATGAAGAGCTAAGAGCGCTTATGGACATGAAAGCCACTTTGGACCCAGAAAGTCACTATCTTTCCTCGTGGACCTTCAGTGGCAATCCATGTGATGGCTCGTTCGAAGGGGTAGCTTGCGATGAAAGGGGTCAGGTGGCTAACATTTCGTTGCAGGGGAAGGGTCTCTCGGGGAAGCTCTCGCCTGCCATTGCTGGGCTCAAGCAGTTGACGGGACTTTACTTGCATTATAACTCTTTGCATGGAGAGATACCCAGAGAAATTGCAAACTTGACTAAAATAAGCGATTTGTATTTGAATGTGAATCATCTGTCTGGGGAAATCCCTTCTGAGATAGGCAACATGGAGAACTTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCATACCTACACAACTTGGTGCATTGAAGAAGCTTATTGTTCTTGCTCTGCAATCAAACAATTTAACTGGTGCTATCCCTGCTAGTTTAGGTGATTTGGGAATGCTAATGAGGCTAGATTTGAGCTCTAATCACCTCTTTGGTTCCATTCCCACTCGATTAGCTGATGTTCCTTCACTGCGAGTTCTAGATGTTCGCAACAACACCCTCTCTGGAAATGTACCTCCTGCTCTGAAGAGACTAGATGATGGATTTTTGTACGAGTTCAATCTGGGATTATGTGGAGTTGGGTTCTCATCCCTGAAAACTTGCAATGCTTCGGATCATGTCAATCCTGGCAGGCCTAAGCCTTACGGTGCAGGTTTAGATGGTGCATCAACGAAAGATATACCGGAAACTGCAAATGTACAATTGCCTTGCAATGGAACTCCGTGCCAAAGTTCATCAAAATCCAAACATACGGCGTCTATTACTGTTGGCATTGTTGTGGTTGCAATTGCAGTATCTGCAATTGGTTTTCTTACTTTCACACAGTATCGCAGGCGAAAGCAAAAACTTAGGAGCTCCTTTGATATCTCAGATAATCGTCTAAGTACTGACCAACAAGCCAAGGGGATGTGCAGGAAAAATGGATCTCCTTTGGTCAGCCTTGAATACTCCAGTGGATGGGACCCTTTGGCTGATGGCAAAAATTTCAATGGGGATAGCCCGGATCTGTTCAATAGTTTCAGGTTCAACTTGGAAGAGGTGGAGACAGCTACTCAGTATTTCTCAGAGTTGAACTTGTTGGGCAAGAGTAACTTCAGTGCAAATTATAAAGGAATGTTAAGAGATGGGTCTGTTGTTGCTGTTAAGAGCATCAGTAAAACAAGTTGCAAGTCTGATGAAGCTGAGTTTTTGAAGGGACTGAACATTTTGACCTCACTGAGGAATGAGAATTTAGTGAGGCTGAGAGGATTTTGTTGCTCGAGGGGACGGGGTGAGTGCTTTTTGATCTATGATTTTGTTCCTAATGGAAATCTTTCGCACTACCTTGATGTCAAGGAAGGTGAAGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATAGCATATTTACATGCTTACAAAGCAAACAAGCCTGCCCTTGTCCACCAAAACATCTCAGCTGAGAAAGTGCTCATTGATCAGCGATTCAACCCAATGCTTTTGGATTCCGGCCTCTACAAGCTTCTTACCAATGACATTGTGTTCTCGGCACTGAAGGCCAGTGCAGCGAAGGGTTATCTAGCTCCAGAATACACCACCACCGGCCGGTTCACAGAGAAAAGCGATGTATATGCTTTTGGGGTGCTTCTTTTCCAGATCCTCTCAGGGAAAAAAAAGATCACCAGCTCAATGCGTCTTGCTGCAGAATCCTCCAGGTTCCAAGAATTCATTGACCCAAATCTCCATGGCAGATTCTTTGAGTGTGAGGCAGCTAAGCTTTCAAAAATGGCTTTGCTTTGCTCCCATGAGTCTCCTGTTGAGAGGCCATTAATGGAAGCCATTGTTCAAGAACTGGGAAATTGCCGTAGCTGTCTCTGA 2052 0.443 MGFSALSLLFSFLAFLLIPTWVCGNEELRALMDMKATLDPESHYLSSWTFSGNPCDGSFEGVACDERGQVANISLQGKGLSGKLSPAIAGLKQLTGLYLHYNSLHGEIPREIANLTKISDLYLNVNHLSGEIPSEIGNMENLQVLQLCYNQLTGSIPTQLGALKKLIVLALQSNNLTGAIPASLGDLGMLMRLDLSSNHLFGSIPTRLADVPSLRVLDVRNNTLSGNVPPALKRLDDGFLYEFNLGLCGVGFSSLKTCNASDHVNPGRPKPYGAGLDGASTKDIPETANVQLPCNGTPCQSSSKSKHTASITVGIVVVAIAVSAIGFLTFTQYRRRKQKLRSSFDISDNRLSTDQQAKGMCRKNGSPLVSLEYSSGWDPLADGKNFNGDSPDLFNSFRFNLEEVETATQYFSELNLLGKSNFSANYKGMLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLIYDFVPNGNLSHYLDVKEGEGEVLEWSTRVSIVKGIAKGIAYLHAYKANKPALVHQNISAEKVLIDQRFNPMLLDSGLYKLLTNDIVFSALKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILSGKKKITSSMRLAAESSRFQEFIDPNLHGRFFECEAAKLSKMALLCSHESPVERPLMEAIVQELGNCRSCL 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1695 683 ProSiteProfiles Protein kinase domain profile. 411 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1695 683 Gene3D Phosphorylase Kinase; domain 1 389 489 - -
Glsi01g1695 683 Pfam Protein tyrosine and serine/threonine kinase 415 676 IPR001245 GO:0004672|GO:0006468
Glsi01g1695 683 SUPERFAMILY Protein kinase-like (PK-like) 387 676 IPR011009 -
Glsi01g1695 683 FunFam Protein NSP-INTERACTING KINASE 2 382 489 - -
Glsi01g1695 683 Gene3D Transferase(Phosphotransferase) domain 1 490 682 - -
Glsi01g1695 683 FunFam Leucine-rich repeat receptor-like kinase 26 135 - -
Glsi01g1695 683 FunFam Protein NSP-INTERACTING KINASE 2 490 680 - -
Glsi01g1695 683 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
Glsi01g1695 683 Gene3D Ribonuclease Inhibitor 21 266 IPR032675 -
Glsi01g1695 683 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Glsi01g1695 683 SUPERFAMILY L domain-like 23 235 - -
Glsi01g1695 683 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 677 - -
Glsi01g1695 683 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1695 Glsi-ChrGlsi01 78047918 78051120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1695 7 524 Miscellaneous Gene Families AT4G22730 55.682 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Glsi01g1695 PK_Tyr_Ser-Thr 9.4e-36 CL0016