Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1687 ATGGGATTCTGGGGTATCGACGTGAAACCTGGCAAACCATATCCTTATCATGCGGATAATGTACAAGGGAAGCTTCATGTAACTCAGGCAACTTTAGGCCTTGGCTCATCAACAGAGAGAAGCATTCTTCAATGCTCTGCTGGACACAAAAGTCCAGTCTTCTTGTGTTCGTTGCTGCCCAATAAAATTGAGTCGTGCCCTTTGAATCTTGAGTTTGACATTTATGACTTAGTGGCCTTCTCAGTGATTGGTCCCCGTAGCATTCATCTCTCTGGTTATTTTGTGGATGATGATGGGGATGACCTTAGGGACGATGATGATACTGGTTCTTTTGGAGAGGATATTGGTGAAACAGAGACAGAGGAGTCTTCTGAATACAACACTGAAGATGAATATGCTGATGACTTCATTGACGATAGTGATATTGACATTTATCCACCTTCACCAGTCCCAAACAGTGGAGTTGTAATCGAGGAAATAGTGGATGATGATAAACCTGAAAGTGGAGATGGTTCTTCTAAGAAGTTGAAGAAAAAGGATGAAATGGCTAACTCAAAAGACAGCAAAAATTCTCAGCATCAAATTGTTGTTAGGGGTGATAAGGGCATCCCTGTTCTGGAAAGTGAAGATGAAGATGGTTTTCCAATTTCTACATCGGATAAAGGCAAATCTGATTCTCAGAAGCCAGAAGCAAAAGTGAAAGAAGAACAGACACACAAGAGAACAGAGAAAGCCAATAAAAAGAAATCAAAAGATGGTGATGATTCTGCTGCCTTGAAAAGAAAAGTTGAAGGTGTTGAAGAAGATGAGCATTCAGAAGGGAAAAAGAAGAAGAAAAAGAAGTTGAAAGAACATGGTAAAGGGGAAAGTGCTCAAGTATCTGGTAATAGTAATGAGACTAACGTTCCTAGCGTGCATGAAAAGCATCCTAAGGAGGTGAAAACAACACGCAATTTGAACCATGTCTCTGATGCAGAGGATGAGCATGAAGGAAAGCTATCCAATGAAAAGGTCCTTGATGAGAAGAAAAAGAAGAAAAAGAAGAAGAAAAAGACCCAAAAGGATGAAGGAGTGATTAATGCAACTCAAACTGCTACAACTTTGGAAAATCAGAATACCTCAACCTTAGAGAGAGAGGAGAAAGAAACTGAAGCCAAGCCATCTCAAGTGAGAACCTTTCCGAATGGGTTGGTTATTGAGGAACTATCCATGGGTAAACCAGATGGCAAAAAAGCTGCTCCTGGAAAACAGGTCAGTGTTAAATACATTGGCAGGCTAAAAAAGAATGGGAAAATATTTGACTCGAATGTCGGGAGAGCACCCTTTAAATTTCGCCTTGGAGTGGGACAAGTCATCAAGGGTTGGGACGTTGGGGTCAATGGTATGAGGATTGGAGACAAAAGAAGAATCACAATTCCACCATCAATGGGTTATGGAGATAAACGTGCTGGGAGCATACCGCCAAATTCGTGGCTTGTATTTGATGTCGAATTGGCTGATGTTCGTTGA 1509 0.4115 MGFWGIDVKPGKPYPYHADNVQGKLHVTQATLGLGSSTERSILQCSAGHKSPVFLCSLLPNKIESCPLNLEFDIYDLVAFSVIGPRSIHLSGYFVDDDGDDLRDDDDTGSFGEDIGETETEESSEYNTEDEYADDFIDDSDIDIYPPSPVPNSGVVIEEIVDDDKPESGDGSSKKLKKKDEMANSKDSKNSQHQIVVRGDKGIPVLESEDEDGFPISTSDKGKSDSQKPEAKVKEEQTHKRTEKANKKKSKDGDDSAALKRKVEGVEEDEHSEGKKKKKKKLKEHGKGESAQVSGNSNETNVPSVHEKHPKEVKTTRNLNHVSDAEDEHEGKLSNEKVLDEKKKKKKKKKKTQKDEGVINATQTATTLENQNTSTLEREEKETEAKPSQVRTFPNGLVIEELSMGKPDGKKAAPGKQVSVKYIGRLKKNGKIFDSNVGRAPFKFRLGVGQVIKGWDVGVNGMRIGDKRRITIPPSMGYGDKRAGSIPPNSWLVFDVELADVR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1687 502 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 410 498 IPR001179 GO:0003755
Glsi01g1687 502 MobiDBLite consensus disorder prediction 160 389 - -
Glsi01g1687 502 PIRSF FK506-bp_FPR3 153 324 IPR023566 GO:0003755
Glsi01g1687 502 PIRSF FK506-bp_FPR3 1 53 IPR023566 GO:0003755
Glsi01g1687 502 PIRSF FK506-bp_FPR3 50 260 IPR023566 GO:0003755
Glsi01g1687 502 PIRSF FK506-bp_FPR3 216 502 IPR023566 GO:0003755
Glsi01g1687 502 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 279 - -
Glsi01g1687 502 FunFam Peptidyl-prolyl cis-trans isomerase 390 502 - -
Glsi01g1687 502 Coils Coil 335 355 - -
Glsi01g1687 502 MobiDBLite consensus disorder prediction 98 129 - -
Glsi01g1687 502 SUPERFAMILY FKBP-like 324 501 - -
Glsi01g1687 502 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Glsi01g1687 502 Gene3D - 358 502 IPR046357 GO:0003755
Glsi01g1687 502 MobiDBLite consensus disorder prediction 203 275 - -
Glsi01g1687 502 MobiDBLite consensus disorder prediction 357 373 - -
Glsi01g1687 502 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 415 502 IPR001179 GO:0003755
Glsi01g1687 502 MobiDBLite consensus disorder prediction 160 187 - -
Glsi01g1687 502 Gene3D Nucleoplasmin core domain 1 100 - -
Glsi01g1687 502 MobiDBLite consensus disorder prediction 304 341 - -
Glsi01g1687 502 MobiDBLite consensus disorder prediction 94 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1687 Glsi-ChrGlsi01 77982694 77987995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1687 415 502 Calmodulin-binding Proteins AT5G48570 48.889 9.14e-17 81.3