Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1660 ATGGACAAAGGGAAGAAGCAACATAAATTATTGGCAGCTGCTTTTGACGACAATTATAATGAAGCAAGTGTTAGTGATAATGATCAAAAGAAGATGATTCGTAGGGAAACTGAAAGGCAAAGAAGGATGCAAATGTCGTCCCTTTGTGATTCCCTCCTATCTTTGCTCCCTTTTGAACTCATCAAGGGAAAGCATTCAGTGTCAGATCACATAGGCGAGGCTGCAAGTTACATAAAAGATTTGGAGGAGAAGACCCATGAACTCCAAATTAAGAGAGATAACCTCAAACATGAGGTAAATTCAAGTTTGCTTGATGAAAGTTCAAACCATTCAAAGTTTGTGAGCATTGATCCTTTTCCTGGCGGTGTGGAAATTTCCATAGACAGTGGCTTGGAGGAGAGCAGTTTTCCTCTATCACTTCTGCTGGAAATATTGATCCAAGAAGGTTGTAATGTTGTTAGCTGTGCGTACAGCCAAGTGAATGGGAGGCTATATCACTCTATTAAGGCTGAGGTGGATAACTTGGCATGCCTTGATCTAGCTGGGTTGCAACAGAAACTGAATCACGTGATCTTGTATTCAAGGTATAGCTCCGAGTGA 600 0.4117 MDKGKKQHKLLAAAFDDNYNEASVSDNDQKKMIRRETERQRRMQMSSLCDSLLSLLPFELIKGKHSVSDHIGEAASYIKDLEEKTHELQIKRDNLKHEVNSSLLDESSNHSKFVSIDPFPGGVEISIDSGLEESSFPLSLLLEILIQEGCNVVSCAYSQVNGRLYHSIKAEVDNLACLDLAGLQQKLNHVILYSRYSSE 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1660 199 Coils Coil 78 98 - -
Glsi01g1660 199 Gene3D - 20 110 IPR036638 GO:0046983
Glsi01g1660 199 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 29 81 IPR011598 GO:0046983
Glsi01g1660 199 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 26 189 - -
Glsi01g1660 199 Pfam Helix-loop-helix DNA-binding domain 31 82 IPR011598 GO:0046983
Glsi01g1660 199 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 100 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1660 Glsi-ChrGlsi01 77689724 77690654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1660 35 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 36.932 4.31e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi01g1660 HLH 8.4e-06 No_clan