Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1644 ATGTGCCAGCAAGCTTCAAAGCACAGTCAACGTATCAACCTCTGCTTCTCTGTTCTTCTCGCTGCGTCAAAAACATTTATCTCGTTCAGGATGGAAGCAAATCAAGAACAGGGTATTGGGGATAAAGACGAGGATTTCAACGACGAAGAAGAAAGCCATAGTGCCGATATATCTTCTGAGACTACGTCAATGGTGGACAGGCCGGAATCGAATTTTCCGGAGCCAGTGCCGCCGTCGCCGGTGGTCCCCATGAAAGAAGAACTCCCGGAAACAGAGCATAGCGCGGATGAGTCTCTTCCAATGGGCTTTATTCAGGTACCGTTGACGAGGTCAACGCCGGTCGGAAAGACGGTGGTGTCGGGGAGGAAACCTTCCAAGGATCGCCACACGAAGGTTGAGGGCCGTGGCCGGAGAATTCGAATGCCGGCTACTTGTGCCGCGAGAATCTTCCAGCTAACCCGAGAGCTCGGGCACAAGTCCGACGGAGAGACAATCAGGTGGTTACTGGAGCACGCTGAACCGGCAATCATAGAAGCGACAGGTACCGGAACCATCCCCGCCATCGCCGTCTCCGTCGGCGGCACTCTAAAGATCCCAACCTCCTCGCCGGCAAGACCAGACGGAGAAGAAACCCCGAGGAAACGAAGAAGACGGCCATCGAACAGCGAGTTTATTGACGTGAAAGATCCAATCTCAATGCCTTCAGGGCTAGCTCCGATTACTCCAATGTCATACGGCGCCGTTGGGGGTGGCAGTAGTGGCGGTGGTGCACCGGGAGGACTAGTCCAAGTCCCGTTGTGGCCTGTGGGTGGGTCAAATGCATCACCAGGTCCTTTCTTCATGTTCCCACATACTACTGTTGGTTCTGCAAATCAGCCACAATACTGGGCAATTCCTGCAACTGCAACCCCATTTTTCAACGTTCAAGCAAGACCCATTTCGAGTTTCATTTCTGCTATGCAATCCAGTGACACTCCTTCATGTTCCGCCTCTAATGGTGCTTCGGGTTCTGCTAATTCTTCCTCCACTATGGCCCCTAGTTTGAGCTCAGGAACAAGTTCTACTGTTAGTGCTACTACAACAACGACGACTCACATGCTTAGGGATTTCTCTTTGGAAATTTATGACAAGAAAGAACTGCAATTTTTGGGTCGCTCTGCAAATTCAGAACCACCTAGTTCAAAGCCCTGA 1191 0.5164 MCQQASKHSQRINLCFSVLLAASKTFISFRMEANQEQGIGDKDEDFNDEEESHSADISSETTSMVDRPESNFPEPVPPSPVVPMKEELPETEHSADESLPMGFIQVPLTRSTPVGKTVVSGRKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSPARPDGEETPRKRRRRPSNSEFIDVKDPISMPSGLAPITPMSYGAVGGGSSGGGAPGGLVQVPLWPVGGSNASPGPFFMFPHTTVGSANQPQYWAIPATATPFFNVQARPISSFISAMQSSDTPSCSASNGASGSANSSSTMAPSLSSGTSSTVSATTTTTTHMLRDFSLEIYDKKELQFLGRSANSEPPSSKP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1644 396 ProSiteProfiles TCP domain profile. 125 179 IPR017887 -
Glsi01g1644 396 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 97 350 IPR005333 GO:0003700
Glsi01g1644 396 MobiDBLite consensus disorder prediction 196 228 - -
Glsi01g1644 396 MobiDBLite consensus disorder prediction 114 135 - -
Glsi01g1644 396 MobiDBLite consensus disorder prediction 207 224 - -
Glsi01g1644 396 MobiDBLite consensus disorder prediction 321 359 - -
Glsi01g1644 396 MobiDBLite consensus disorder prediction 121 135 - -
Glsi01g1644 396 Pfam TCP family transcription factor 125 192 IPR017887 -
Glsi01g1644 396 MobiDBLite consensus disorder prediction 37 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1644 Glsi-ChrGlsi01 77482737 77484987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1644 122 383 TCP Transcription Factor Family AT5G51910 53.704 4.34e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi01g1644 TCP 3.3e-28 No_clan