Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1630 ATGTACATCTTTAATTCAATTCCTTACTTTCCCTCTCAAATCACTTACTTTCTCTTCCTAAATCCACTCTTTTTAACTCTACTTGGAAAACTCTCAGTCAATAGTAGCTACCCAGTTCTTTGCCCACTCTTCTCTTCTTCAATTCGCTCTTCAAAGTCCAAAAAAGGAAACTTTTCGGCGATTACTATGTTTACAGTCACTCATTTTTCGGACCCACATCCGTTTAGGTCGGAATATAAGTCTTTAGAGGTTTTGGACACGTCGTCGCCTGTGTCCGATAGTGGCAGCGGCAGCGGTGTTGGTAATTTGGTGGCTTTGTCGGATGAGGAGGTGATGTTGGCTGCAAGTCACCCCAAGAAGCGGGCCGGAAGGAAGAAATTCCGGGAGACTCGGCACCCTGTGTATCGGGGTGTGAGGCGGAGGAACTCCGGCAAGTGGGTGTGCGAAGTGCGTGAGCCTAATAAGAAGACGAGGATTTGGCTGGGGACATTTCCCACAGCGGATATGGCGGCACGGGCTCACGATGTGGCGGCAAAAGCTCTGAGGGGCCGGTCCGCTTGTCTTAATTTTGCAGATTCGGCATGGCGGTTGCCAGTCCCGGCGTCGACGGAAGCAAAGGATATTCAGAAGGCAGCGGCAGAAGCGGCAGAGGCATTCCGGCCGGGGATCGAATTAGATACCGATGAAGCAAGACAGAAAAATGCCGAGGCCGGGACAAAGGAGGCGGCCACGGCGGAGCAGCAAGGTATATTTTATATGGATGAAGAAGACAGAGTGTTGGGGATGCCGGAATTGCTGAGGAACATGGCGGACTCTGTGCTGATGTCGCCAACTCATTACTTTGGGGATCCTTGTGATGGTGCTGACGTGGAAGTGGATGATGCTGAGGTGTCATTATGGAGTTATTCAATTTAA 915 0.5038 MYIFNSIPYFPSQITYFLFLNPLFLTLLGKLSVNSSYPVLCPLFSSSIRSSKSKKGNFSAITMFTVTHFSDPHPFRSEYKSLEVLDTSSPVSDSGSGSGVGNLVALSDEEVMLAASHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARAHDVAAKALRGRSACLNFADSAWRLPVPASTEAKDIQKAAAEAAEAFRPGIELDTDEARQKNAEAGTKEAATAEQQGIFYMDEEDRVLGMPELLRNMADSVLMSPTHYFGDPCDGADVEVDDAEVSLWSYSI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1630 304 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 93 302 IPR045277 GO:0003700
Glsi01g1630 304 ProSiteProfiles AP2/ERF domain profile. 134 191 IPR001471 GO:0003700|GO:0006355
Glsi01g1630 304 Pfam AP2 domain 133 183 IPR001471 GO:0003700|GO:0006355
Glsi01g1630 304 SMART rav1_2 134 197 IPR001471 GO:0003700|GO:0006355
Glsi01g1630 304 CDD AP2 135 193 IPR001471 GO:0003700|GO:0006355
Glsi01g1630 304 Gene3D AP2/ERF domain 134 192 IPR036955 GO:0003700|GO:0006355
Glsi01g1630 304 FunFam Ethylene-responsive transcription factor 2 133 192 - -
Glsi01g1630 304 SUPERFAMILY DNA-binding domain 134 193 IPR016177 GO:0003677
Glsi01g1630 304 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Glsi01g1630 304 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1630 Glsi-ChrGlsi01 77375194 77376108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1630 86 302 AP2-EREBP Transcription Factor Family AT4G25470 61.364 5.27e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi01g1630 AP2 5.3e-15 CL0081